Aeromonas mytilicola subsp. aquatica: ACFWHB_00725
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Entry
ACFWHB_00725 CDS
T11432
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amyq Aeromonas mytilicola subsp. aquatica
Pathway
amyq03420
Nucleotide excision repair
amyq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACFWHB_00725 (uvrD)
03430 Mismatch repair
ACFWHB_00725 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyq03400
]
ACFWHB_00725 (uvrD)
Enzymes [BR:
amyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACFWHB_00725 (uvrD)
DNA repair and recombination proteins [BR:
amyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACFWHB_00725 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACFWHB_00725 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XJS61288
UniProt:
A0ACH3ELR5
LinkDB
All DBs
Position
154368..156539
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AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNRPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGES
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
SERLGKELWTEGAEGDPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKTLLNDKVLTGRAGNAVRGFVDLIDALEEQVGMLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGVVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaacgacaagcaaagagacgcggtggcggcc
cctcgcagcaatctgctggtgctggcgggcgccggctcgggcaagacacgggtgctggtg
caccgtatcgcctggctgatgcaggtggagcgttgctcacccttctccatcatcgccgtg
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaggtgataggggac
ggggtgcgcggcatgtggataggcaccttccacggcatcgcccaccgcttgctgcgggcc
caccatctggatgcgggcctgccccaggacttccagatcctcgactccgacgaccaatat
cgcctcatccgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccccgc
gccgtgatgggttacatcaacggcaagaaggacgaggggctgcgccccggcgacatcgac
ctctacggcgaccccgtcacccgcacttatcagcagatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggattttgccgagctgttgctgcgcgcccacgagctgtgg
ctcaaccggccccatatcctcgagcactaccgggatcgcttccagaacatactggtggac
gagttccaggacaccaacggcatccagtacgcctggttgcggatgctggcgggcgagtcc
ggcaaggtgatgatagtgggtgacgatgaccagtccatctacggctggcgcggcgccaag
atagagaacatccagcgcttcctgaccgactatcagggcgccgagaccatacgccttgag
cagaactaccgctccaccgccaatatcctgaaagccgccaactgcgtcatcgccaacaac
tcggagcggctcggcaaggagctgtggacagagggggccgagggtgacccgatttcgctc
tatgccgccttcaacgaggtggacgaagcccgcttcgtggtcggccgcctcaaggattgg
aaagagaaaggcggcctcttggccgactgcgccattctgtatcgctccaacgcccagtcc
cgggtgctggaagaggcgctgatgcaggacgccatgccctaccgcatctacggcggcctg
cgcttcttcgagcgccaggagatcaaggacgccatggcctacctgcgtcttatcaacaac
agaggcgacgacgccagcttcgagcgggtggtcaacaccccgacccggggcataggcgat
cgcaccctggagatattgcgcaacaacgcccgggatcagggccagaacctgtggcagtcg
gccaagacgctgctcaacgacaaggtactgaccggccgcgccggcaatgcggtgcgcggc
tttgtggatctcatcgatgcgctggaagagcaggttggcatgctgcccctgcaccagcag
gcggacatcgccattcaaaattccggcctcaaggccatgtatctggcggagaagggcgag
aagtcccaggcacgggtagagaacctggacgagctggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagacatgagcgatctctccgccttcctcgcccacgcggcgctg
gaatccggcgagaatcaggcggacgaatacgccgatgcggtgcagctgatgacgctgcac
agtgccaaggggctggagttccccctggtgctgctggtcggcgtggaggaagggatgttc
cccagccagcaatccaccgaggagtcgggccgcctggaagaggagcgccgcctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tatggccgcgaaatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatacggctgcgcacccaggtcagccgcccgacccagtacggccgcttcagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctc
catccgaaattcggggaaggggtggtactcaacttcgaaggtgtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtcaccgcttacgcgagattg
gaggcgctctaa
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