Aeromonas mytilicola subsp. aquatica: ACFWHB_06775
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Entry
ACFWHB_06775 CDS
T11432
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
amyq Aeromonas mytilicola subsp. aquatica
Pathway
amyq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACFWHB_06775 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyq03400
]
ACFWHB_06775 (xthA)
Enzymes [BR:
amyq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACFWHB_06775 (xthA)
DNA repair and recombination proteins [BR:
amyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACFWHB_06775 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XJS62421
LinkDB
All DBs
Position
complement(1443835..1444641)
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AA seq
268 aa
AA seq
DB search
MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPVADVEAMGYHVVFHGQK
GHYGVAIMSKQPPLDVQKGFPTDPEDAQRRMIMASFKREDGSLIKVMNGYFPQGESQDHE
TKFPAKQKFYEDLQHYLETHHTPDDPLVLIGDVNISPTDLDIGIGEANRKRWLRDGKCSF
LPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSKGFDENRGLRIDLIMASNALKD
KVTETGIDYELRGIEKPSDHAPIWACFA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatctcttttaatatcaatggcctgcgcgcccgtcttcatcagttgcaagcc
atcatcgacaagcaccagccggatgtgatcggcctgcaggagatcaaggttcacgacgaa
gccttcccggtggcggacgtggaggccatgggctatcacgtggtgttccacggccagaag
ggtcactacggggtcgccatcatgagcaagcagccgcccctcgacgtgcagaaggggttc
cccaccgatcccgaggatgctcagcgccggatgatcatggccagcttcaaacgggaagac
ggctccctcatcaaggtgatgaacggctatttcccgcaaggggagagccaggatcacgag
accaagttcccggccaagcagaagttctatgaggacctgcagcactacctcgagacccac
cacaccccggacgatcccctggtgctgatcggcgatgtgaacatctcccccacggatctc
gacatcggcatcggcgaggcgaaccgcaagcgctggctgcgggatggcaagtgctccttc
ctgcccatagagcgggagtggatggagcgcctcaaggggttcgggctgaccgacaccttc
cgcgccgccaaccccaccgagtgcgagcgcttctcctggtttgactaccgctccaaaggc
tttgacgagaaccggggcctgcgcatcgacctcatcatggcgtccaatgccctcaaggac
aaagtgaccgagaccggcatcgactacgagctgcgcggcatcgagaaaccctcggatcac
gcccctatctgggcctgcttcgcctga
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