Aeromonas mytilicola subsp. aquatica: ACFWHB_08445
Help
Entry
ACFWHB_08445 CDS
T11432
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
amyq Aeromonas mytilicola subsp. aquatica
Pathway
amyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACFWHB_08445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amyq03019
]
ACFWHB_08445
Enzymes [BR:
amyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACFWHB_08445
Messenger RNA biogenesis [BR:
amyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACFWHB_08445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
NACHT
UvrD-helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XJS62728
LinkDB
All DBs
Position
1790196..1791491
Genome browser
AA seq
431 aa
AA seq
DB search
MRFESFDFAPEILRAVSECGYQEMTPVQQQAIPTIRRGSDVLASAQTGTGKTAAFALPIL
QRLVDNPAPAQPSNARVLILTPTRELAAQVASNINDFAKYLDISVLTLVGGGKQDVQARK
LKAGAHIIVATPGRLLEHLTACNLSLSGVETLVLDEADRILDMGFSADVQQILQAVNKTR
QNLLFSATFSDAVKKLANLMLDRPQIISVNKQNSTADTVSHTVYPVEQKRKRELLSELIG
KQNWQQVLVFASTRESCDVLVEELNLDGIKSAVVHGEKAQGSRRRALREFMEGKVRVLVA
TEVAARGLDIPDLQYVVNYDLPFLAEDYVHRIGRTGRAGKSGMAVSFVSREEERTLLEIE
ALIGQKIRRIMVPGYEVSSRDELIKQLQERRRFGKRPQREDNAAAQVMAEAKLQGQRLKR
LAAAKKPRQSK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgaatcgttcgattttgcccccgagattttgcgtgccgtctcagagtgcggt
tatcaggagatgacccctgtgcagcagcaggcgatcccgaccatacgccgtggcagcgac
gtgctggccagcgcccagaccgggaccggcaagacggcggcctttgcgctgcccatactg
caacgtctggtggataacccggccccggcccaaccttccaacgcccgggtgctgatcctt
accccgacccgcgagctggccgcccaggtggcgagcaacatcaacgacttcgccaagtat
ctggacatcagcgtgctgaccctggtcggtggtggcaagcaggacgtgcaggcccgcaaa
ctcaaggccggtgcgcacatcatagtggcgactccgggccgtctgctcgagcacctgacc
gcctgcaacctcagcctctccggtgtcgagaccctggtgctggacgaagcggatcgcatc
ctcgacatgggcttcagtgccgatgtgcagcagatcctgcaggctgtgaacaagacccgt
cagaacctgctgttctccgccaccttctccgacgccgtgaagaagctggccaacctgatg
ctcgacagaccgcagatcatcagcgtcaacaagcagaactccaccgccgataccgtcagc
cacaccgtctatccggtcgagcagaagcgcaagcgcgagctgctctccgaactcatcggc
aagcagaactggcaacaggtgctggtgttcgccagtacccgcgagagctgtgacgtgctg
gtggaagagctgaacctcgacggcatcaagtccgccgtggtccatggcgagaaggctcag
ggcagccgtcgccgcgccctgcgcgagttcatggaaggcaaggtacgggtgctggtcgcc
accgaagtggccgcccgtggtctggacatcccggatctgcagtacgtggtcaactacgat
ctgcccttcctggcggaggattacgtccaccgcatcggccgcaccggccgcgccggcaag
agcggcatggccgtctccttcgtcagccgcgaagaggagcgcaccctgctggagatcgag
gcgctgatcggccagaagatccgccgcatcatggtgccgggctacgaggtgagcagccgt
gacgagctgatcaagcagttgcaggagcgccgccgtttcggcaagcgcccgcagcgggaa
gacaacgccgccgctcaggtaatggccgaggccaagctgcagggccagcgcctcaagcgt
ctggcggccgccaagaagcctcgccagtcgaagtaa
DBGET
integrated database retrieval system
