Aeromonas mytilicola subsp. aquatica: ACFWHB_09790
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Entry
ACFWHB_09790 CDS
T11432
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
amyq Aeromonas mytilicola subsp. aquatica
Pathway
amyq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACFWHB_09790 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyq03400
]
ACFWHB_09790 (uvrB)
DNA repair and recombination proteins [BR:
amyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACFWHB_09790 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACFWHB_09790 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
DUF87
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XJS62982
LinkDB
All DBs
Position
2125611..2127623
Genome browser
AA seq
670 aa
AA seq
DB search
MNKPFKLASQFQPAGDQPAAIARLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPENSVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDVINQRDILRRLAELQ
YTRNDVAFSRGTFRVRGEVIDIYPAESDKLALRVELFDEEVERLSQFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIDHIKEELKGRREQLLSLNKLVEEQRISQRTQFDIEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PVIEVRPVTTQVDDLLSEIRLRVAVEERVLVTTLTKRMAEDLTEYLADHDVRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMKVAIEETERRRALQHAHNLEHGITPTGLNKSVGDVMDMG
GSRTAGKPGRGSRKAAEPQGEYHARSASEIAKEIKRMEEQMFQHARDLEFEQAAAMRDQI
QRLRGELIES
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcctttcaagctggccagccagtttcaacccgcgggggatcagcccgcggcc
atcgcccgcctgctcgatggcatagagtccggcctcgctcatcagaccctgctcggggtg
actgggtcgggcaagaccttcaccatggccaacgtcatcgccaccctgaaccgcccgacc
atgatactggctcccaacaagaccctggccgcccagctctatggggagatgaaggagttc
ttccccgagaactcggtggagtacttcgtctcttattacgactattaccagccggaagcc
tatgtgccgaccacggacacctttatagagaaggatgcctccatcaacgatcacatcgag
cagatgcgattgtcggccaccaaggcgctgctggagcggcgcgacgtggtgatcgttgcc
tcggtatcggccatctatggtctgggggacccccaggcctacctcagcatgatgctgcac
ctgaaagtgggggatgtgatcaaccagcgggacatattgcgccgcctcgccgagctgcaa
tacacccgcaacgacgtggcgtttagccgcggcaccttccgggtgcgaggggaggtgatc
gacatctaccctgccgaatcggacaagctggccctgcgggtggagctgtttgatgaggag
gtggagcgcctctcccagttcgatcccctgaccggtgccatagagcagactgtggtgcgc
tacaccatctaccccaagacccactacgccacgccgcgggagacaatcctcggggccatc
gatcacatcaaggaagagctcaagggacgccgcgagcagctgttgtccctgaacaagctg
gtggaagagcagcgcatcagccagcgtacccagttcgacatcgagatgatgcaggagctg
gggtactgctccggcatcgagaactacagccgctatctgtcggggcgtgcccccggcgag
ccgccgcccaccctgttcgactacctgccgggggatggtttgctcatcatcgacgagtcc
cacgtcacagtgccgcagataggcgccatgttcaaaggggacagatcccgcaaggagacc
ctggtggagtacggcttccggctcccctcggcgctcgacaacaggccgctgaagtttgac
gagttcgaggccctgatgccccagacggtgttcgtctcggcgacccctggcccctacgag
ctggagaagtccggcggcgatgttgtgcagcaggtggtgcgtcccaccggcctgctcgat
cctgtcatcgaggtgcgtcccgtcaccacccaggtggacgacttgctctccgagatccgg
ctgcgggtggcggtggaggagcgggtgctggtcaccaccctgaccaagcggatggcggag
gatttgaccgaatacctggcggatcacgacgtgcgggtgcgctacctgcactcggacata
gacacagtggagcgggtggagatcatccgcgatctgcgcctcggcaagttcgacgtgctg
gtgggcatcaacctgctgcgggaagggctcgacatgccggaggtgtcgctggtggccatc
ctggatgcggacaaggagggcttcctgcgctccactcgctccctcatccagaccataggc
cgcgccgcccgcaacctcaacggcaaggtcattctctacggcgacaccatcaccaactcc
atgaaagtggccatagaagagaccgagcggcgccgtgccctgcagcacgcccacaacctg
gagcacggcatcacgccaacaggcctcaacaagtcggtgggggatgtgatggacatgggg
ggcagccgcaccgccggcaaaccgggcagaggcagtcgcaaggcggccgagccgcaaggg
gagtaccatgcccgctccgctagcgaaatcgccaaagagatcaagcggatggaggagcag
atgttccagcatgcccgggatctggagttcgagcaggccgccgccatgcgggatcagatc
cagcggctgcgcggcgagttgatcgagtcatga
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integrated database retrieval system
