Aeromonas mytilicola subsp. aquatica: ACFWHB_16160
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Entry
ACFWHB_16160 CDS
T11432
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amyq Aeromonas mytilicola subsp. aquatica
Pathway
amyq03410
Base excision repair
amyq03430
Mismatch repair
amyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACFWHB_16160 (recJ)
03430 Mismatch repair
ACFWHB_16160 (recJ)
03440 Homologous recombination
ACFWHB_16160 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyq03400
]
ACFWHB_16160 (recJ)
DNA repair and recombination proteins [BR:
amyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACFWHB_16160 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACFWHB_16160 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACFWHB_16160 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
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Other DBs
NCBI-ProteinID:
XJS60217
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Position
complement(3533567..3535297)
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AA seq
576 aa
AA seq
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MPLQIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSASQLLPPQRLFGMEQAVP
LLADALTAQQRILIVGDFDCDGATSSALCVLALRAMGGHHVDFLVPNRFEFGYGLTPEIV
ELAVARGAEFLITVDNGISSIAGVAAAKAAGMRVLVTDHHLPGQELPDADAIVNPNQRGC
DFPSKSLAGVGVAFYLMAALNTHLRQSGWYERQGIRAPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSL
GVACLLSDDLNLARQLAAEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKIKEKYYRPVIAFAQSSDTELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIEAFGRAFEAVIAELVTPELLTGVLLTDGELLPDELSLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKLMLTTDSGHAVDAIAFGVDLKRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcaaatccgtcgtcgtccgcgagttgatgattcccatctgcccgccaccctg
catcccctgcttcgtcaaatcttcgccagccgcggcgtggaggatcccgccctgctggag
cgcagcgccagccagctgctgccgccccagcggctgttcggcatggagcaggcggtgccc
ctgctggcggatgccctgacggcgcagcagcgcatcctcatcgtcggcgacttcgactgc
gacggcgccaccagctcggccctgtgcgtgctggccctgcgggccatggggggccatcac
gtcgattttctggtgcccaaccgcttcgagttcggctacggcctcacccccgaaatcgtc
gagttggcggtggcccggggcgccgagtttctcatcactgtggataacggcatctccagc
attgccggggtggcggcggccaaggcggccgggatgcgggtactggttaccgatcaccac
ttgccgggccaggagttgcctgatgccgatgcgatagtgaaccccaaccagcgtggctgc
gacttcccctccaaatccctggccggggtcggggtggccttctatctgatggcggccctc
aacacccatctgcgccagagcggctggtatgaacgccagggcattcgcgcccccaatgtg
gcggactatctcgatctggtggcgctcggcacagtcgccgacgtggtggcgctggatggc
aacaaccgtatcctggtccatcaggggctgcagcggatccgggccggtcgctgccgcccc
ggcatccaggcgctggtggacgtatcgggccgcgatggccgccgcctgtgcgccgccgat
ctcggctttgccctggggcctcgcctcaatgcggtgggccgtctcgatgacatgtccctc
ggggtcgcctgtctgctgagcgatgatctcaacctggcgcgccagcttgcggcggagatg
gacagccttaaccaggagcgcaaggagatagagcaggggatgcagcaggaggccctcgcc
accctggagcagatccggtttcgcgacggcgaggtgccaagcggcatagtgctgcacagg
gacgagtggcatcagggggtggtgggcttggtggcctccaagatcaaggagaagtactac
agaccggtgattgcgtttgcgcagagcagcgacaccgagctcaagggctcagggcgctcc
atccccggggtgcacctgcgcgatgcgctggagctgctcgatacccgccatccgggcctg
atgggcaagtttggcggccacgccatggcggcggggctgaccctgcccaaggccaatata
gaggcgttcggccgggcatttgaagccgtcatcgccgagctggtgaccccggagctgctg
accggggtgctgctcaccgacggcgagctgctgccggacgagctgagtctggagctggcg
gagctcatccgcgcctccggcccctggggccaggccttccccgagccgctgttcgacggc
gaattcgtgctggtgcaacagcggctggtgggggagaagcacctcaagctgatgctgacc
acggattccggtcatgcggtggatgccatcgccttcggggtggatctcaagcgctggcca
gatgcctcggtgaaacgggtgcggctggtctatcggctcgacgtcaacgagtggcgcggc
aaccgcagcgtccagctgctggtggagcatctggaggccgccggtctctag
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