KEGG   Amycolatopsis sp. TNS106: CVV72_00940
Entry
CVV72_00940       CDS       T10876                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
amys  Amycolatopsis sp. TNS106
Pathway
amys03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:amys00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CVV72_00940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amys03400]
    CVV72_00940
DNA repair and recombination proteins [BR:amys03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CVV72_00940
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QXV55725
LinkDB
Position
190984..191928
AA seq 314 aa
MRPVWSGSLSLGLVTVPVRLYSAVEDHTVHFRQFQRGTEDRIRYRRVNERTGKEVGYEDI
VKGYELGNGEYVVVEPDELDEIAPGRSKLLDIESFVELDAIDPMFFDKTYWLAPAKDEFE
RPYALLLEAMDSSGKAGIAKFVMRGREYLALVRSGDGVMVLNTLHFAADLRDPAEQLPDL
PGKAKARGKELDMAVNLIDAMSDDWRPEDYRDTYTDRVRDLIKAKKKGDTITPATEPGEP
TKVVDLFEALSKSVESGKAKKKSGAKKPPAKKAAAKKDLSSLSKADLDKLARERNIKGRS
KMTRAGLEKALKAS
NT seq 945 nt   +upstreamnt  +downstreamnt
atgcgtccggtctggagcggttcgctttcgctcggtctggtgacggtgccggtccggctg
tacagcgcggtcgaggaccatacggtgcacttccgccagttccagcggggaaccgaggac
cgcatccggtaccggcgggtgaacgagcgcaccggcaaggaagtcggctacgaggacatc
gtcaagggctacgagctcggcaacggtgaatacgtggtcgtcgaacccgacgaactcgac
gagatcgcgcccggccggtcgaagttgctcgacatcgagagcttcgtcgagctggacgcc
atcgacccgatgttcttcgacaagacgtattggctcgcgcccgccaaggacgagttcgag
cgtccgtacgcgttgctgctcgaggcgatggactcgtcgggcaaggccgggatcgccaag
ttcgtcatgcgcggacgcgagtacctggcgctcgtccgctcgggggacggcgtgatggtg
ctcaacaccctgcatttcgccgccgacctgcgggatcccgccgagcagctgccggacctg
ccgggcaaggcgaaggcgcgcggcaaggaactcgacatggccgtcaacctgatcgacgcg
atgagcgacgactggcggccagaggactaccgcgacacctacaccgaccgcgtgcgggac
ctgatcaaggccaagaagaagggcgacaccatcacgcccgcgaccgaacccggtgagccg
acgaaggtcgtcgacctgttcgaggcgctttcgaagagcgtggagagcggtaaggccaag
aagaagtccggggcgaagaagcctcccgcgaagaaggccgcggcgaagaaggacctgtcc
tcgctgtcgaaggcggatctggacaagctggcacgggagcggaacatcaaggggcggtcg
aagatgacccgcgccggcctggaaaaggcgctcaaggcatcgtga

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