Amycolatopsis sp. TNS106: CVV72_02595
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Entry
CVV72_02595 CDS
T10876
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03030
DNA replication
amys03410
Base excision repair
amys03420
Nucleotide excision repair
amys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVV72_02595
03410 Base excision repair
CVV72_02595
03420 Nucleotide excision repair
CVV72_02595
03440 Homologous recombination
CVV72_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amys03032
]
CVV72_02595
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_02595
Enzymes [BR:
amys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVV72_02595
DNA replication proteins [BR:
amys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CVV72_02595
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CVV72_02595
NER (nucleotide excision repair)
GGR (global genome repair) factors
CVV72_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QXV56019
LinkDB
All DBs
Position
530215..532956
Genome browser
AA seq
913 aa
AA seq
DB search
MSPSENTTVANATPATAQAERPKLLLIDGHSMAYRAFFALPAENFKTKTGQTTNAVFGFT
SMLINLLRDEAPTHLAVAFDLSRKTFRSETYAEYKANRSTTPDEFKGQVGLVEDVLKVLG
IPALTKENYEADDIIATLTTQATAEGFDVLICTGDRDALQLVTDQVTVLYPKRGVSEMTR
FTPEAVEEKYGLTPAQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIRQFGSFNELVDRVD
EVKGKVGDALREHLGAVMLNRQLTELIRDVELELGPTMLELRPWDREAVHALFDELEFRV
LRDRLFATLQSAEPEAEEGFEVSGSKLAPGALAEWLSAHTGQDQPVGLAFRTTGASVRSD
LKAITFAAADGEGAYVDVTAMDAEDDKALTAWLADEKIQKIGHELKVPLHAVRARGWTFA
GLVMDTALAAYLVRPGQRTFELDDLALRYLHRELRSEADTGDGQLSLLDGGAEDMEQKEI
QAELVKARAVFELAGALTKELEELGGAQLLAELELPLLQVITGLEAAGIAVDIEHLTNLE
AHYLGRVTQAAEEAYAVIGKQVNLGSPKQLQVILFDELGMPKTKRTKTGYTTDAEALQSL
FEKTEHPFLQHLLEHRDATRLRTTVEGLIKSVADDGRIHTTLLQTIAATGRLSSVDPNLQ
NIPIRTEEGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDEGLIQAFNSGEDLHTF
VASRAFSLPPEEITPELRFRVKAMSYGLAYGLSAYGLSQQLRISTEEAKEQMEAYFSRFG
GVRDYLHSVVGDAAKVGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADII
KVAMLNVHKALTEAKLKSRVLLQVHDELVLEVAEGEREQLEPLVRQGMGSAYELAVPLEV
SVGYGRSWNDAAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgagtgagaacacgaccgttgccaacgccacacccgccaccgcacaggccgag
cggcccaaactgctgctgatcgacggccattcgatggcgtatcgcgcgttcttcgcgctg
cccgcggagaacttcaagacgaagaccgggcagacgacgaacgcggtattcgggttcacc
tcgatgctcatcaacctgctgcgcgacgaggcgccgacccacctcgcggtggcgttcgac
ctctcccgcaagacgttccggtcggagacgtacgcggagtacaaggccaaccgcagcacc
accccggacgagttcaagggccaggtcgggctggtcgaggacgtgctgaaggtcctcggc
atcccggcgctgaccaaggagaactacgaagccgacgacatcatcgccacgctcacgaca
caggcgaccgccgaaggtttcgacgtcctcatctgtacgggtgaccgtgacgcgctccag
ctggtgaccgaccaggtcaccgtgctgtacccgaagcgcggcgtgtcggagatgacccgc
ttcaccccggaggcggtcgaggagaagtacggcctcaccccggcgcagtacccggacttc
gccgcgctgcgtggcgacccctcggacaacctgcccagcatcccgggcgtcggtgagaag
acggccgcgaagtggatcaggcagttcggctcgttcaacgagctggtcgaccgcgtcgac
gaggtcaagggcaaggtcggcgacgcgctgcgcgagcacctcggcgccgtcatgctgaac
cgccagctcaccgagctgatccgcgacgtcgagctggagctcggccccacgatgctcgag
ctgcgcccgtgggaccgcgaggccgtccacgcgctgttcgacgagctggagttccgcgtc
ctgcgagaccggctcttcgccaccctgcagagtgccgagcccgaggccgaggagggtttc
gaggtcagcggttcgaagctcgcgccgggcgcgctcgcggaatggctgtccgcgcacacc
ggccaggaccagcccgtcggcctggcgttccgcaccaccggggcgtcggtccgctccgac
ctgaaggccatcacgttcgcggccgcggacggcgagggcgcgtatgtcgacgtcaccgcg
atggacgccgaggacgacaaggcgctcacggcctggctcgccgacgagaagatccagaag
atcggccacgagctcaaggtcccgctgcacgccgtccgggcgcgcggctggacgttcgcc
gggctcgtcatggacaccgcgctcgcggcgtacctggtccgcccggggcagcgcactttc
gaactcgacgacctggccctgcggtacctgcaccgcgagctgcggtccgaggccgacacc
ggggacgggcagctttcgctgctcgacggcggcgccgaggacatggagcagaaggagatc
caggccgagctggtcaaggcccgcgcggtcttcgagctcgccggcgcgctgaccaaggag
ctcgaagaactgggcggcgcgcagctgctcgccgagctcgaactgccgctgctgcaggtg
atcaccggcctcgaggcggcggggatcgcggtcgacatcgagcacctgaccaacctggaa
gcgcactacctcggccgggtgacacaggccgcggaggaggcgtacgcggtcatcggcaag
caggtcaacctcggttcgccgaagcagctgcaggtcatcctgttcgacgagctcggcatg
ccgaagaccaagcgcaccaagaccggctacaccaccgatgccgaggcgctgcagagcctg
ttcgagaagaccgagcacccgttcctgcagcatctgctggagcaccgggacgcgaccagg
ctgcgcaccacggtcgagggcctgatcaagtcggtcgccgacgacggccgtatccacacc
acgctgctgcagacgatcgccgccaccggacggctctcctccgtcgacccgaacctgcag
aacatcccgatccgcaccgaggaaggccgccgcatccgtgacgccttcgtcgtcggtgac
gggtacgccgagctgatgacggcggactacagccagatcgaaatgcggatcatggcgcac
ctctcgcaggacgaagggctgatccaggccttcaacagcggcgaggatctgcacactttc
gtggcgtcgcgggcgttctcgctgccgccggaggagatcacgccggaactgcgtttccgg
gtgaaggcgatgtcgtacggcttggcgtacgggctttcggcgtacgggctttcgcagcag
ctgcggatctcgaccgaagaggccaaggaacagatggaggcgtacttctcccgtttcggc
ggcgtgcgcgactacctccattcggtcgtgggcgacgcggcgaaggtcggttacaccgag
acgatcttcggccgccgccggtatctgccggacctcaacagcgacaaccggcagcgccgc
gaaatggccgagcggatggcgctcaacgcccccatccagggcagcgcggccgacatcatc
aaggtcgccatgctcaacgtgcacaaggcgctgaccgaggcgaagctgaagagccgcgtg
ctgctgcaggtccacgacgagctcgtcctcgaggtcgccgaaggtgagcgcgagcagctg
gaaccgttggtgcgccagggaatgggctccgcttacgaactggcggtcccgctggaggtc
tcggtcggatacggccggtcctggaacgacgccgcgcattag
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