Amycolatopsis sp. TNS106: CVV72_02660
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Entry
CVV72_02660 CDS
T10876
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CVV72_02660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
amys03011
]
CVV72_02660
Ribosome [BR:
amys03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CVV72_02660
Bacteria
CVV72_02660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
Phage_T7_Gp15
DUF2110
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
QXV56031
LinkDB
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Position
547451..548950
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AA seq
499 aa
AA seq
DB search
MTTDTATAPTAPAGPQQVAINDIGSEEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLL
DIGYKTEGVIPSRELSIKHDVDPAEVVTVGDEVEALVLQKEDKEGRLILSKKRAQYERAW
GTIEELKEKDEPVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKI
IELDKNRNNVVLSRRAYLEQTQSEVRSEFLNALAKGQVRKGVVSSIVNFGAFVDLGGVDG
LVHVSELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAI
GQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEIPEQVVQVNGDVMVKVIDIDL
ERRRISLSLKQANEGVTPETEFDPTQYGMAAEYDAEGNYIYPEGFDPDTQEWQEGFDKQR
EEWERQYAEAHTRYEAHMKQVQKAAEADAEAAADAATGVTSSDSGEQSYTSAPAEAKSGG
TLASDEQLAALREKLSGGA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacaccgccaccgccccgaccgcccccgccgggccccagcaagtcgctatc
aacgacatcgggtcggaggaagacttcctcgctgcgatcgacaagacgatcaagtacttc
aacgatggcgacatcgtcgaaggaaccatcgtcaaggtcgaccgtgacgaggtcctgctc
gacatcggctacaagaccgagggtgtcatcccctcgcgcgagctctccatcaagcacgat
gtcgacccggctgaggttgtcaccgtcggcgatgaggtcgaagccctggtcctccagaag
gaggacaaggaaggccgtctgatcctgtccaagaagcgtgcgcagtacgagcgcgcctgg
ggcacgatcgaggagctcaaggagaaggacgagcccgtcaagggcaccgtcatcgaggtc
gtcaagggcggcctcatcctggacatcggcctgcgcggcttcctgccggcgtcgctggtc
gagatgcgccgcgtgcgcgacctgcagccgtacgtcggccgcgagctcgaggcgaagatc
atcgagctggacaagaaccgcaacaacgtggtcctgtcccgccgcgcctacctggagcag
acccagtccgaggtgcgcagcgagttcctcaacgcgctcgccaagggccaggtccgcaag
ggcgtcgtgtcgtccatcgtcaacttcggtgccttcgtggacctgggtggcgtcgacggc
ctggtgcacgtctccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgag
gtcggccaggaggtcacggtcgaggttctggacgtcgacatggaccgcgagcgcgtctcg
ctgtcgctgaaggcgacccaggaagacccgtggcgtcagttcgcccgcacccacgcgatc
ggccagatcgtgccgggcaaggtcaccaagctcgtcccgttcggtgcgttcgtgcgcgtc
gaggagggcatcgagggcctggtgcacatctccgagctggccgagcgccacgtggagatc
ccggagcaggtcgtccaggtcaacggcgacgtgatggtcaaggtcatcgacatcgacctc
gagcgtcgtcgcatctcgctgtcgctgaagcaggcgaacgagggtgtcacgccggagacc
gagttcgacccgacccagtacggcatggccgccgagtacgacgccgagggcaactacatc
taccccgaaggcttcgacccggacacccaggagtggcaggaaggcttcgacaagcagcgt
gaggagtgggagcgtcagtacgccgaggctcacacccgctacgaggctcacatgaagcag
gtccagaaggccgccgaggccgacgccgaggccgccgcggacgccgcgaccggtgtcacc
tccagcgactcgggcgagcagagctacacctccgctccggccgaggccaagagcggtggc
acgctcgccagcgacgagcagctcgcggctctccgcgagaagctgtcgggcggcgcgtga
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