Amycolatopsis sp. TNS106: CVV72_03960
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Entry
CVV72_03960 CDS
T10876
Name
(GenBank) hypothetical protein
Organism
amys Amycolatopsis sp. TNS106
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
DUF7507
CARDB
DUF7619
Hormone_2
Cohesin
CBM_2
DUF4139
Motif
Other DBs
NCBI-ProteinID:
QXV56260
LinkDB
All DBs
Position
843728..850108
Genome browser
AA seq
2126 aa
AA seq
DB search
MAERRGRNRWRRGMAVLTTIVVALLMNAPVPANAQIQPRGAGTERPIGPEPVYSGLAHGG
ITMAANSVVQCGVGVVCNESASNASPVSWIKTDPAAPGNTASAASLNVPAGAKVLNARLY
WQFNPVASSGTSGDGNRGNQVSMKTPGSNAYQRITAETYDWFPATTTGGFPTLYAYGGAA
DVTSLVANAGTGQYTVADIQACQGQSISGTNLGCWGGWSLVVAYELPSEPLRYLQVWDGL
QRVAGGSTPSSATIALSGIKAPTSRQPNVELGIVAGDGDAPITGDYLQVGPDASSLQTIA
MPAPGGVVTNNAFSSRIDRVTATGSGTNVTSRDPNPVNNVGYDSRSIDITGKVPAGTTAL
QVKIGTVGDALYPQTIWLVTDALEPDLQITKANDPVGNTDDNPPGYVTKGSEITYSFDVA
NRHADGSVTDLDTATNVVLTDTLPDGVTFVAGSNPNCSAAGQLVTCNLRNLRPGQAQKVD
FKVKVGASVPDGTKLDNTGKVTFRGEDTGRPQERTSNTVRNTVASPGYQLTKTVDLAEAI
PGDTLTYQVAVRNTGVIPVPAFTVRDTLPPGTTYVSSSPSKGTASGTGPIDWAVNGLAVG
ETATLTVRVKVEEAAIGKELVNRANVPIGPPPVVPPDNRCPDDPAAACAKTEVPSPSYTV
TKTADKESANPGDVVRYKVTVANTGKVTAADLKVVDDLTGVLDDAVYQNDATASPGAVSY
VEPKLTWTGTLAAGASAEFTYTVKVKSPNTGDNRLKNVVTSETPGGNCPPGSTDPKCGTT
TPVSGLLIEKSVDKQSANPGDVVKYAVTVRNTGQTKLSGATFTDDLTQVLDDADYQNDGA
ATVGGVTYAAPKLTWTGDLEVGATATVTYTVKVKSPNTGDNVLRNAVSSETPGGNCPPGS
TDPKCGTTTPVSGLLIEKSVDRQSANPGDVVKYTVTVRNTGQTKISDATFTDDLTQVLDD
ADYQNDGAATVGGVTYAAPKLTWTGDLEVGATSTVTYTVKVKNPNPGDNLLKNAVSSETP
GGNCPPGSTDPKCGTTTPVSGLTIEKSVDKQSADPGDVVKYTVTVRNTGQTKLSGATFTD
DLTQVLDDADYQNDGAATVGGVTYAAPKLTWTGDLEVGATSTVTYTVKVKNPNPGDNLLK
NAVSSETPGGNCPPGSTDPKCGTTTPVSGLSIEKTVDKQSANPGDIVKYTVTVRNTGQTK
LSGATFTDDLTQVLDDADYQNDGAATVGDVSYAAPKLTWTGDLEVGATATVTYTVKVKNP
ASGDKKLINTVTSETPGGNCPPGSTDPKCGTTTPVSGLSIEKTVDKQSANPGDIVKYTVT
VTNTGQTKLTGATFTDDLTQVLDDADYQNDGAATVGDVSYAAPKLTWTGDLGVDETATVT
YTVKVKNPNTGDNRLKNVVSSETPGGNCPPGSTDPDCGTETPVSGLEIKKTVDKQSANPG
DIVKYTVTVKNTGQTKLTDATFTDDLTQVLDDAVYRNDGAATVGGVTYAAPKLTWTGSLE
IGQTSTVTYTVQVKNPGDGDKKLVNAVTSETPGGNCPPGSTDPDCGTTTPISGLLIKKTA
DKKSVDPGDTVKYTITVTNTGQTKQDAATFTDDMTEVLDDAEYQNDGAATIGSVTYAAPK
LTWTGSLEIGQTSTVTYTVKIKNPDTGDKKLSNVVTSETPGNNCPPDSTDPNCVADVPSR
ELTVKKTSDRQTANPGDVVTYTVTVTNTGKVDLVGEDAARVTDDLSEVLDDADYADDAAA
APVAGTFAFTAPNLVWAGDLPVGASTTLKYSVKVKNPVTGDHELRNTVSTNTPGTCPPQS
DDPACSTVTPVPGISLEKKADKATANPGDVVKYTVTVRNTGKTKLTGATFTDDLTEVLDD
AVFQKDGTATIGSVTYEEPKLTWTGDLEIGQTATVTYSVKVTKTDGDGKLTNVITTDTPG
GNCPPGSKDPKCGTTTPLSSLKIKKTVDKAEAKPGEVVTYTVTVENTGQATVDDATFTDD
LTQVLDDATFDGTAKASTGAVTYSAPRLTWKGVLKPGEKATVTYAVTVRKPAIGDHRLRN
VVTSDTPGGNCPPGSANPDCGTDTRVPPEPPTPQPPDKPNPQPPTTPRPPGLAVTGSPVK
TMTVLALGMLAIGALLLLAGRRRRES
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgtcgtgggcggaatcggtggcgccggggcatggcggtgctcacgacgatc
gtcgtggctttgctgatgaatgccccggtacccgcgaacgcccagatccagcctcgcgga
gcgggcaccgagcggccgatcgggccggaaccggtgtattccggactggcgcacggtggc
atcacgatggccgccaactccgtcgtccagtgcggcgtcggcgtggtctgcaacgagtcc
gcgagcaacgcgagcccggtgtcgtggatcaagaccgacccggccgcgcccggcaacacc
gcgtccgcggcgagcttgaacgtcccggccggcgcgaaggtgctcaacgcccggctgtac
tggcagttcaaccccgtcgccagcagcgggacctccggcgacgggaaccggggcaaccag
gtctcgatgaagaccccgggctcgaacgcctaccagcggatcaccgccgaaacctacgac
tggttccccgcgaccaccacgggcggcttcccgaccctgtacgcctacggtggcgccgcc
gacgtcacgtctctcgtggcgaacgccggcaccggccagtacacggtggccgacatccag
gcctgccagggccagtcgatcagcgggacgaacctcggctgctggggtggctggtcactg
gtggtcgcctacgaactgcccagcgagccgctgcgctacctgcaggtgtgggacggtctg
cagcgagtcgccggtggcagcacgccgagttcggcgaccatcgccctgagcgggatcaag
gcgccgacgtcgcgccagcccaacgtcgaactcggtatcgtcgcgggtgacggcgacgcg
cccatcaccggtgactatctccaggtcggcccggacgcgtccagcctccagaccatcgcc
atgcccgcgccgggcggcgtggtgaccaacaacgcgttcagcagccgcatcgaccgggtc
acggccaccggttcgggcacgaatgtcacgtcgcgcgaccccaatccggtgaacaacgtc
ggctacgactcccgcagcatcgacatcaccggcaaggtccccgccgggaccaccgcgctc
caggtgaagatcggcaccgtcggcgacgcgctgtacccgcagacgatctggctcgtcacc
gacgcgctcgaacccgacctccagatcaccaaggccaacgacccggtcggcaacaccgac
gacaatccgccgggttacgtcaccaagggcagcgagatcacctacagcttcgacgtcgcc
aaccggcacgccgacggcagtgtcaccgatctcgacaccgcgacgaacgtggtgctcacc
gacaccttgcccgacggcgtcacgttcgtggccgggtccaatccgaactgttcggcggcc
gggcagctggtcacctgcaacctgcggaatctgaggccggggcaagcgcagaaggtggac
ttcaaggtcaaggtcggcgcctcggtgccggacggcaccaaactcgacaacaccggcaag
gtgaccttccgcggcgaggacaccgggcggccgcaggagcgcacgtcgaacacggtgcgg
aacacggtcgcctcgccgggataccagctgacgaagacggtcgacctcgccgaggcgatc
ccgggtgacaccctgacctaccaggtggccgtgcggaacaccggcgtgatccccgtgccc
gcgttcacggtgcgcgacaccttgccaccgggaacgacctacgtttcgtccagtccttcg
aagggcaccgcgtccggtaccgggccgatcgattgggccgtgaacggcctcgccgtcgga
gagacggccacgctgaccgtgcgcgtgaaggtcgaagaggccgccatcggcaaggagctg
gtgaaccgcgcgaacgtcccgatcgggccgccgccggtcgtcccgccggacaaccgctgc
ccggacgatcccgccgccgcgtgcgcgaagaccgaggtgccgtcaccgtcgtacacggtg
acgaagaccgcggacaaggaatccgcgaaccccggtgacgtcgtgcgctacaaggtcacc
gtcgccaacaccggaaaggtcaccgcggcggacctcaaggtcgtcgacgatctgaccggg
gtgctggacgacgcggtctaccagaacgacgccaccgcgtcgcccggtgcggtgtcctat
gtggagccgaagctgacctggacgggcacgctcgccgcgggggcgagcgccgagttcacc
tacacggtgaaggtcaagagcccgaacaccggtgacaaccggctgaagaacgtggtgacg
tcggagaccccgggcggtaattgcccaccgggttcgacggatccgaagtgtggcacgacg
acgccggtgtcgggtctgttgatcgagaagtcggtggacaagcagtcggcgaatccgggc
gatgtcgtgaagtacgcggtcacggtgcggaatacgggccagaccaagttgagcggtgcg
acgttcacggacgatctgacccaggtgctcgatgacgcggactatcagaacgatggtgcg
gcgacggtcggtggtgtcacgtatgcggcgccgaagctgacgtggaccggtgatctcgaa
gtcggtgccacggcgacggtgacgtacacggtgaaggtcaagagcccgaacacgggcgac
aacgtgctcaggaacgcggtgtcgtcggagactccgggcgggaactgtccgccgggttcg
acggatccgaagtgcgggaccacgacgccggtgtcgggtctgttgatcgagaagtcggtg
gacaggcagtcggcgaatccgggcgatgtcgtgaagtacacggtgaccgtgcggaacacg
gggcagacgaagatttccgatgcgacgttcaccgacgatctcacgcaggtgctcgatgac
gcggactatcagaacgatggtgcggcgacggtcggtggtgtcacgtatgcggcgccgaag
ctgacgtggaccggtgacctggaagtcggtgcgacatcgacggtcacctacaccgtgaag
gtcaagaaccccaaccccggcgacaacctgctcaagaacgcggtgtcgtcggagactccg
ggcgggaactgtccgccgggttcgaccgatccgaagtgcgggaccacgacgccggtgtcc
gggctgacgatcgagaagtcggtcgacaagcagtcggccgacccgggcgatgtcgtgaag
tacacggtcacggtgcggaacacgggccagaccaagttgagcggtgcgacgttcaccgac
gatctgacgcaggtgctggacgacgccgactaccagaatgacggtgcggcgacggtcggt
ggtgtcacgtatgcggcgccgaagctgacgtggaccggtgacctggaagtcggtgcgaca
tcgacggtcacctacaccgtgaaggtcaagaaccccaaccccggcgacaacctgctcaag
aacgcggtgtcgtcggagactccgggcgggaactgtccgccgggttcgacggatccgaag
tgcgggaccacgacgccggtgtcgggtctgtcgatcgagaagaccgtggacaagcagtcg
gcgaaccccggcgacatcgtgaagtacacggtcacggtgcggaatacgggccagaccaag
ttgagcggtgcgacgttcaccgacgatctgacgcaggtgctggacgacgccgactaccag
aatgacggtgcggcgacggtcggcgatgtgtcgtatgcggcgccgaagctgacgtggacc
ggtgatctcgaagtcggtgccacggcgacggtgacgtacacggtgaaggtcaagaatccc
gcttctggcgacaagaaactcatcaacacggtcacctcggagactccgggtggtaattgc
ccgccgggttcgacggatccgaagtgcggcacgacgacgccggtgtcgggtctgtcgatc
gagaagaccgtggacaagcagtcggcgaaccccggcgacatcgtgaagtacacggtgacc
gtcaccaacactggtcagacgaagctgacgggtgcgacgttcaccgacgatctgacgcag
gtgctggacgacgcggactatcagaacgatggtgcggcgacggtcggcgatgtgtcgtat
gcggcgccgaagctgacgtggaccggtgacctcggcgtcgacgagacggcgacggtcacg
tacacggtcaaggtcaagaacccgaacaccggcgacaaccggctcaagaacgtcgtttcg
tcggagacgccgggcgggaactgcccgccgggctccacggatccggactgcggcacggaa
accccggtttcgggtctggagatcaagaagaccgtcgacaagcagtcggcgaaccccggc
gacatcgtgaagtacacggtcacggtcaagaacaccggtcagacgaagctgaccgacgcc
accttcaccgacgatctgacccaggtgctcgacgacgccgtctaccggaacgacggagcg
gcgacggtcggtggtgtcacgtacgcggcgccgaagttgacgtggaccggctcgctggag
atcgggcagacctcgacggtcacttacacggttcaggtgaagaatccgggcgacggagac
aagaagctcgtcaacgccgtcacgtcggagaccccgggcgggaactgcccgccgggctcg
accgatccggactgcggcacgaccaccccgatctccgggctgctcatcaagaagaccgcc
gacaagaagtcggtcgaccccggcgacacggtgaagtacacgatcaccgtcaccaacacc
gggcagaccaagcaggacgcggccaccttcaccgacgacatgaccgaagtcctggacgac
gccgagtaccagaacgacggagcggcgaccatcggcagcgtcacgtacgcggcgccgaag
ctgacgtggaccggctcgctggagatcgggcagacctcgaccgtcacctacacggtcaag
atcaagaacccggacaccggcgacaagaaactgtccaatgtggtcacttcggagactccg
ggcaacaactgcccgccggattcgaccgatccgaactgcgtcgcggacgtgccgtcgcgc
gaactgacggtcaagaagacgtcggacaggcagaccgcgaacccgggtgacgtcgtcacc
tacacggtcaccgtcaccaacaccggcaaggtcgacctggtcggcgaggatgccgcacgg
gtcacggacgacctgtccgaggtgctcgacgacgccgactacgccgacgacgccgcggcg
gccccggtcgccgggacgttcgccttcaccgcgccgaacctggtgtgggcgggcgatctc
ccggtgggtgcttcgaccacgctgaagtattcggtgaaggtgaagaaccccgtgaccggc
gaccacgaactgcggaacaccgtcagcaccaacaccccgggcacctgtccgccgcagtcc
gacgacccggcgtgctcgaccgtcactcccgttcccggcatctcgctggagaagaaggcg
gacaaggccacggcgaacccgggcgacgtcgtgaagtacacggtgaccgtgcgcaacacc
ggcaagacgaagctgaccggtgcgacgttcaccgacgacctcaccgaggtcctcgacgac
gcggtgttccagaaggacggcacggcgacgatcggttcggtgacctacgaggaaccgaag
ctgacctggaccggtgacctggagatcgggcagacggcgacggtcacgtacagcgtcaag
gtgaccaagaccgacggcgacggcaagctgaccaacgtcatcaccaccgacactccgggt
ggcaactgcccgccgggcagcaaggatccgaagtgcgggacgacgacaccgctgtcgagc
ctgaagatcaagaagaccgtcgacaaggcggaggcgaaaccgggcgaggtcgtgacgtac
accgtcacggtggagaacaccggacaggccacagtggacgacgcgacgttcaccgacgat
ctgacccaggtgctcgacgacgccaccttcgacggcacggcgaaggccagtacgggagcg
gtcacctactccgcgcccaggctgacctggaagggcgtgctcaagccgggggagaaggcc
accgtcacctacgccgtcaccgtgcggaagccggcgatcggtgaccaccgcctccgcaac
gtcgtcacgtcggacacgccgggcggcaactgcccgccgggttcggcgaaccccgactgc
ggcaccgacacccgggtgccgccggagccgccgacgccgcagccgccggacaagcccaac
ccgcaaccgccgacgaccccgcgtccgcccgggctggccgtgaccggctcaccggtgaag
acgatgacggtgctggcgctgggcatgctggccatcggcgcgctgctgctcctcgccgga
cggaggcgccgggagtcctag
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