Amycolatopsis sp. TNS106: CVV72_06145
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Entry
CVV72_06145 CDS
T10876
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CVV72_06145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_06145
Enzymes [BR:
amys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVV72_06145
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVV72_06145
RecFOR pathway proteins
CVV72_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_16
AAA_5
TIP49
Mg_chelatase
IstB_IS21
nSTAND3
AAA_14
AAA_3
Resolvase
RNA_helicase
DUF815
Sigma54_activ_2
AAA_33
Zeta_toxin
NTPase_1
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
QXV56632
LinkDB
All DBs
Position
1387890..1388972
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AA seq
360 aa
AA seq
DB search
MDYDAVTEFETDGDTETLSALPQTGEREVETTLRPRKLDEFVGQPRVREQLELVLESARR
RGVPPDHVLLSGPPGLGKTSMAMIVAAELNAAIRITSGPALERAGDLAAMLSNLAPGDVL
FIDEIHRIARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGSLTGP
LRDRFGFTGQMEFYSDSELELVARRAATILDIDIDRDGCAEIARRSRGTPRIANRLLRRV
RDYAEVRADGKVTRKIARAALEVYDVDELGLDRLDRAVLTALVRSFGGGPVGVSTLAVAV
GEEPTTVEEVCEPYLVRAGMLARTPRGRVATAAAWEHLGLPAPAGATRGEQGGPNLFDQD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggactatgacgcagtgacggaattcgagaccgatggcgacactgagacgctctcggcg
ctgccgcagaccggcgaacgcgaggtcgagaccacgctgcgcccgcggaagctggacgag
ttcgtcggccagccacgggtgcgtgagcagctcgaactggtcttggaaagcgcgcgccgc
cggggtgtcccgccggatcacgttctgctctccggtccgccggggctcggcaagacgagt
atggcgatgatcgtcgccgccgaactcaacgccgccatccgcatcacctccggaccggcg
ctggaacgcgcgggcgacctggccgcgatgctgtcgaacctggcacccggcgacgtcctg
ttcatcgacgagatccaccgcatcgcccgccccgccgaggagatgctgtacctcgcgatg
gaggacttccgggtcgacgtcgtcgtcggcaaggggcccggtgccaccagcatcccgctg
gagatcgcgccgttcacgctggtcggcgccacgacgagatccggttcgctgaccggcccg
ctgcgcgaccggttcggtttcaccggccagatggagttctacagcgacagcgaactcgaa
ctcgtcgcccggcgcgccgccacgatcctcgacatcgacatcgaccgggacggctgcgcg
gagatcgcccgccggtcccgcggcacaccccggatcgcgaaccggctcctgcgccgggtg
cgcgactacgccgaggtccgggccgacggcaaggtcacgcgcaagatcgcgcgggccgcg
ctggaggtctacgacgtcgacgaactcggcctcgaccggctcgaccgggcggtgctgacc
gcgctggtccgctccttcggcggcggcccggtcggtgtgtccacgctggccgtcgcggtg
ggggaagaaccgaccaccgtcgaggaggtgtgtgagccttacctggtccgcgccggtatg
ctcgcccgcactcctcgcggccgggtcgccacagcggccgcgtgggaacacctcggcctg
ccggccccggccggcgccacacgcggcgagcagggcggaccgaacctgttcgaccaggac
tga
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