Amycolatopsis sp. TNS106: CVV72_06295
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Entry
CVV72_06295 CDS
T10876
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CVV72_06295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_06295
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CVV72_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QXV56659
LinkDB
All DBs
Position
1423495..1424367
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AA seq
290 aa
AA seq
DB search
MRSMWKGSVSFGLVSIPIQLYAATENKNVSLRQVHEADGGRIQYKRFCTIDGEEVPYAEI
AKGYELPDGEMVVLTDEDMSELPLASSRAIDVLEFVPLESIDPIQFDKTYYLEPQKNAVK
PYVVLRDALQKASHVAVAKVAIRQRETLAILRVHSDVLTMTTMLWPDEVRVPDFGFLHED
PPQVRPQELTMAGSLIDSLSEPVFEQEKYSDSYREALEAMIEAKAAGNQTTKPKVVGAKA
DVVDLMEALQASVSEAKKSRKPAAAKKATAAKKATAAKKPASGKRTPKSA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgatgtggaagggctcggtgtccttcgggctggtgagcatcccgatccagctg
tacgcggccaccgagaacaagaacgtctcgctgcgccaggtgcacgaggccgacggcggc
cggatccagtacaagcggttctgcacgatcgacggcgaggaagtgccctacgccgagatc
gccaagggctacgaactgcccgacggcgagatggtcgtgctcaccgacgaggacatgtcc
gagctgccgctggcgtcgtcgcgggccatcgacgtgctcgagttcgtgccgctggagtcc
atcgacccgatccagttcgacaagacctactacctcgaaccgcagaagaacgccgtcaaa
ccgtacgtggtcctgcgtgacgcgctgcagaaggcgagtcacgtggcggtcgcgaaggtc
gccatccggcagcgggagacgctcgcgatcctgcgggtccacagcgacgtcctgacgatg
acgacgatgttgtggcccgacgaggtccgcgtaccggatttcgggttcctgcacgaggat
ccgccgcaggtgcggccgcaggagctgacgatggcggggtcgctgatcgactcgctctcg
gagcccgtcttcgagcaggagaagtacagcgattcctaccgtgaggccctggaagccatg
atcgaggccaaggccgcgggaaaccagacgacgaaaccgaaggtcgtcggcgcgaaggcc
gacgtcgtcgacctcatggaggctttgcaggccagcgtgagcgaggcgaagaagagccgc
aagcccgcagcggccaagaaggccaccgcggccaagaaggccaccgcggccaagaaaccg
gcgtcgggcaagcgaaccccgaagagcgcctga
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