Amycolatopsis sp. TNS106: CVV72_09360
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Entry
CVV72_09360 CDS
T10876
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
amys Amycolatopsis sp. TNS106
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
amys03051
]
CVV72_09360 (pafA)
Enzymes [BR:
amys01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CVV72_09360 (pafA)
Proteasome [BR:
amys03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CVV72_09360 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QXV57194
LinkDB
All DBs
Position
complement(2097753..2099111)
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AA seq
452 aa
AA seq
DB search
MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLVQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTMLKVGSANLVLEMIEAGVQF
RDFTLDNPIRAIREISHDLTGRRQVRLAGGREASALDIQREYHARAVQHVKETGSSPQSE
RVVELWGRALEAVEQQDFSKIDTEIDWAIKHRLVERYRNKHDLDLSSPRIAQLDLAYHDI
RRGRGIFDLLQRKGLVRRVTDDGEIELAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctttggcatcgagaccgagttcggggtcacgtgcacctttcacggg
caacgcaggctctccccggacgaagtggcgcgttacctgtttcggcgtgtcgtgtcctgg
gggcgttcgtcgaacgtcttcctgtcgaacggctcgcggctctacctcgacgtgggttcc
caccctgagtacgcgacggccgaatgcgacgacctcgtccagctcgtcacgcacgacaag
gcgggggagcggatcctcgaggacctcctggtcgacgccgagcggcggctggcggacgag
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactatctggtgacccgggcgggtgagttctcccggatcgccgacgtg
ctgctgccgttcctggtgacccggcagctcatctgcggcgccggcaaggtgctgcagacg
ccgcgcggcgccgtgtactgcctgtcccagcgagcggaacacatctgggaaggcgtctcc
agcgccaccacgcgctcgcggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gaacgctaccggcgcctgcacgtgatcgtcggcgactcgaacatggccgagccgaccacg
atgctcaaggtcggatcggcgaacctggtgctggagatgatcgaagctggcgtccagttc
cgcgacttcaccctggacaacccgataagggccatccgcgagatcagccacgacctcacc
ggccgccgccaggtgcggctagccggcggccgcgaggcgtccgcgctggacatccagcgt
gagtaccacgcccgcgccgtccagcacgtcaaggagaccggttcgtcgccgcagtcggag
cgcgtcgtcgaactgtggggccgggcgctggaggcggtcgagcagcaggacttcagcaag
atcgacaccgagatcgactgggcgatcaagcaccgccttgtcgagcgctaccgcaacaag
cacgacctcgacctgtcgagcccgcggatcgcgcagctcgacctggcctaccacgacatc
cggcgcgggcggggcatcttcgacctgctgcagcggaagggactcgtgcggcgggtcacc
gacgacggcgagatcgagctggccaaggacaccccgccgcagaccacgcgggcgaagctg
cgcggtgacttcatcgccgccgcgcaggccgccgggcgtgacttcaccgtggactgggtg
cacctcaagctcaacgaccaggcgcagcggaccgtgctgtgcaaggacccgttccgctcg
gtggacgaacgcgtcgagcggctgatcagctcactctga
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