Amycolatopsis sp. TNS106: CVV72_13230
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Entry
CVV72_13230 CDS
T10876
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
amys Amycolatopsis sp. TNS106
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_13230
Enzymes [BR:
amys01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CVV72_13230
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CVV72_13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QXV57850
LinkDB
All DBs
Position
complement(2974989..2976485)
Genome browser
AA seq
498 aa
AA seq
DB search
MSSPPALWLFGDQLGPHFHSTPEHRDREVLLIRSAAAFGRRRFHRQKLHLVEAGMRRLVA
DLGGRARIVDAPTYTDGLRRFGKPVVVHEPGSHAADALVRRLREQGIVADILPTPGFVLS
KQDFSTWISGRRRYLMEDFYRDQRRRFGILLEPDGEPAGGKWNYDHDNRRPPPGRSTLPV
PAPWHPKENAIDQEVRADLDRAEGEGAIHPVGVDGPRRFAVGHAEAVRALRRFLDHRLAT
FGPHQDAMLHADWAMSHALLSVPLNHGLLDPLDVVRKAEERYRDGTAPLASVEGFVRQVL
GWREWVWHLYWHLGPAYSDRNVLRAHEKPPSWWRELDADAVEAACLRSALTGVRDRGYAH
HIERLMVLGNHALQRAYDPAELTDWFATAFVDGFPWVMPANVIGMSQYADGGIVATKPYA
AGGAYINRMSDHCGGCVFDPKKRVGASACPFTAGYWAFLDRNAKRLEGNPRMRQPLNGVK
RLSDLSAVVAQESDRRGF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagctccccgcccgccctgtggttgttcggcgaccagctcggaccgcatttccacagc
acaccggagcatcgtgaccgcgaggtgctgctgatccgctcggccgcggccttcgggcgc
cgccggttccaccggcagaaactgcacctggtcgaagccgggatgcggcggctggtcgcg
gatctgggcggcagggccaggatcgtcgacgcgccgacctacaccgacggcctgcgccgc
ttcggcaagccggtggtggtgcacgaacccggctcacacgccgccgacgcgctcgtcagg
cgactccgcgaacagggcatcgtggcggacatcctgccgacgccgggcttcgttctgtcc
aaacaggacttctcgacctggatctcgggccgtcgccgctacctgatggaagacttctac
cgcgaccagcggcgccgcttcggaatcctgctcgagccggacggtgagccggcaggcgga
aagtggaactacgaccacgacaaccgccgcccgccccccggccggtcgacgctgccggtg
cccgcgccgtggcacccgaaggaaaacgcgatcgatcaggaggtcagggccgacctcgat
cgcgcggaaggcgagggggcgattcacccggtcggcgtcgacggcccacgccggttcgcg
gtcggccacgccgaggccgtccgtgccctgcgccgctttctcgatcaccggctggccacg
ttcgggccgcatcaggacgccatgctccacgcggactgggcgatgtcgcacgccctgctc
tcggtaccgctcaatcacggcctgctcgacccgctcgacgtcgtccggaaagcagaagaa
cgctaccgggacgggacggcaccattggcgagcgtcgaaggcttcgtccgccaagtcctc
ggctggcgggaatgggtgtggcatctctactggcatctcgggccggcttactcggaccgc
aacgtgctccgggcgcacgaaaagccgccgtcatggtggcgggagctggacgccgacgcg
gtcgaggccgcctgcctgcggtccgcgctgacaggcgtccgtgaccgggggtatgcccac
cacatcgaacggctcatggtgctgggcaatcacgctctgcagcgcgcctacgatccggcg
gagctgacggactggttcgccaccgccttcgtcgacggtttcccctgggtgatgcccgcg
aacgtcatcgggatgagccagtacgccgacggcggcatcgtcgcgaccaagccttacgcg
gcgggcggcgcgtacatcaaccggatgagcgaccactgcggcggatgcgtgttcgacccg
aagaaacgcgtcggcgcgtcggcctgcccgttcaccgccgggtattgggcttttctcgac
cgcaacgcgaaacgcctggaaggaaacccgcggatgcggcagccgctcaacggagtgaag
cggctgtccgacctgagtgccgtggtggcgcaggagagcgaccgccggggcttctga
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