Amycolatopsis sp. TNS106: CVV72_17635
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Entry
CVV72_17635 CDS
T10876
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys00900
Terpenoid backbone biosynthesis
amys00997
Biosynthesis of various other secondary metabolites
amys01100
Metabolic pathways
amys01110
Biosynthesis of secondary metabolites
Module
amys_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CVV72_17635
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
CVV72_17635
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amys01006
]
CVV72_17635
Enzymes [BR:
amys01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CVV72_17635
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CVV72_17635
2.5.1.29 geranylgeranyl diphosphate synthase
CVV72_17635
Prenyltransferases [BR:
amys01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CVV72_17635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QXV58631
LinkDB
All DBs
Position
3961258..3962349
Genome browser
AA seq
363 aa
AA seq
DB search
MDTSAYDADLPAHVERALAGFLERAGAEIRRTEPVVGVGIDALAGFVLGGGKRLRPTFAW
WGWRGAGGDPAGPDVEGVLQAVASLELIQACALIHDDLIDSSDSRRGSPTVHIAGAKLHA
DSGWLGSPSTFGLATAVLVGDLALAWADDMFGEAPLPPAALAAARPAWRAMRTEVLAGQY
LDVRTQATGDASPEAALHICKLKTAAYTVQRPLHLGAALGGADDALIATLREFGDEVGVA
FQLRDDLLGVFGDPSVTGKPAGDDLREGKRTLLVALGLQRAAEQGKDAAAKVISDAIGDA
HLSEDAVETVREALQDVGAVDAVERRIDELTDSAMAALDRAHLAEPAPAALTGLVVKATQ
RTY
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggacacgtccgcctacgacgccgatctgcccgcccacgtcgagcgggcgctggccgga
ttcctcgagcgcgccggtgccgagatccgccgtaccgaaccggtcgtcggggtcgggatc
gacgcgctggccgggttcgtcctcggcggtggcaaacgcctgcgcccgacgttcgcctgg
tggggctggcgcggcgcgggcggcgatccggcggggccggacgtcgaaggcgtgctgcag
gcggtggccagcctggagctgatccaggcgtgcgcgctgatccacgacgacctcatcgac
tcctccgattcacggcgcggctccccgacggtgcacatcgcgggcgccaaactgcacgcc
gacagcggctggctgggttcgccgagcacgttcgggctcgcgaccgccgtcctggtcggc
gacctcgcgctggcctgggccgacgacatgttcggcgaggccccgctcccgcccgcggcc
ctcgcggcggcgcggccggcctggcgcgcgatgcgcaccgaggtgctcgccggccagtac
ctcgacgtccgcacccaggccaccggcgacgcttcccccgaggcggcgctgcacatctgc
aagctcaagacggccgcgtacaccgtccagcgcccgctgcacctcggtgccgcgctcggc
ggcgccgacgacgccctgatcgcgacgctgcgcgaattcggcgacgaggtcggcgtggcg
ttccagctgcgggacgacctgctcggggtgttcggcgacccatcggtcaccggcaagccc
gcgggcgacgacctgcgtgagggcaagcggacgctgctggtcgcgctgggtctccagcgc
gcggccgagcagggcaaggacgcggcggcgaaggtcatctccgacgccatcggcgacgcc
cacctgtccgaagacgccgtcgagactgtccgtgaggcgttgcaggacgtcggcgcggtc
gacgcggtggaacgccgcatcgacgagctcaccgattccgcgatggcggcgctggaccgc
gctcacctggccgaacccgctcccgccgcgctgaccgggctggtcgtcaaggcgacccag
cggacgtactga
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