Amycolatopsis sp. TNS106: CVV72_19425
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Entry
CVV72_19425 CDS
T10876
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amys Amycolatopsis sp. TNS106
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amys03032
]
CVV72_19425
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_19425
Enzymes [BR:
amys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CVV72_19425
DNA replication proteins [BR:
amys03032
]
Prokaryotic type
DNA Topoisomerases
CVV72_19425
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVV72_19425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXV63089
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All DBs
Position
4346817..4347752
Genome browser
AA seq
311 aa
AA seq
DB search
MTPDGEPLKDGETIERINRLAIPPAWRRVWISPHENAHIQAVGIDDAGRKQYLYHPEWRR
ARDEEKHERVLALARKLPKLRETVQEDLGSRGLKRERVLAGALRMIDLGVFRTGGESYAD
EHGTHGVATLLCEHVELRGACLVCDYPAKHGIQRKVRLRDEALVRLVRSLRRVRGGDVRL
LAYRDGDGWHEVKADDINDRLREIIGDGFTAKDLRTWNATVLAAAAFADTEKPSSERGLK
RAEKAVMTEVAEGLGNTPAVARRSYVDPRVVEAYRRDRTVERAVRRAAKAADPNEARDIV
ERAVVRLLNGS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ctgaccccggacggcgagccgctgaaggacggggagacgatcgagcggatcaatcggctg
gcgatcccgcccgcgtggcggcgggtgtggatctcgccgcacgagaacgcgcacatccag
gcggtcgggatcgacgacgccgggcggaagcagtacctctatcaccccgaatggcgacgg
gcccgggacgaggagaaacacgaacgcgtcctcgcgctggcgcgaaagctgcccaagctg
cgcgaaaccgtccaggaggatctcggctcgcgcggcctgaagcgggaacgcgtcctcgcc
ggtgccctgcggatgatcgatctcggggtctttcgcaccggcggcgaaagctacgccgac
gagcacggcacccacggggtggcgacgttgctgtgcgagcacgtcgaactccgcggtgcg
tgcctggtgtgcgactaccccgcgaaacacggcatccagcggaaggtccggctgcgggac
gaggcgctggtgcggctggtccgctccctccggcgggtgcggggcggcgacgtccgcctg
ctcgcctaccgcgacggtgacggctggcacgaggtgaaggccgacgacatcaacgaccgg
ctccgggaaatcatcggcgacggcttcaccgccaaggatctgcgcacctggaacgccacc
gtcctggccgcggcggccttcgcggacacggaaaaaccctccagcgaacgagggttgaag
cgggccgagaaggccgtgatgacggaagtcgccgaagggctcgggaacacgccggccgtg
gcgcgacggtcctatgtggacccacgggtggtcgaggcgtaccggcgggaccggaccgtc
gaacgcgcggtacggcgagccgcgaaggcggcggatcccaacgaggcccgcgacatcgtc
gagcgggcggtggtgcggctattgaacgggtcgtga
DBGET
integrated database retrieval system
