Amycolatopsis sp. TNS106: CVV72_22900
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Entry
CVV72_22900 CDS
T10876
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CVV72_22900
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amys01007
]
CVV72_22900
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amys03016
]
CVV72_22900
Enzymes [BR:
amys01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CVV72_22900
Amino acid related enzymes [BR:
amys01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CVV72_22900
Transfer RNA biogenesis [BR:
amys03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CVV72_22900
Prokaryotic type
Other AARSs
CVV72_22900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
DUF6525
Motif
Other DBs
NCBI-ProteinID:
QXV59574
LinkDB
All DBs
Position
complement(5152333..5155650)
Genome browser
AA seq
1105 aa
AA seq
DB search
MANPVSRVAPWKARAGGIVATLVQLAAVFSVILLLAGGVKGPVLRTGDIAFSALSIPTNA
SLVIVLLLVVLGAALRRRKRAALYTLLLFQVGGLAVTLAFQAALLWWPELLKLGPWQVRH
IPHQVWVLAIADLISLGMIAFLWILRPAFPARLAPGAWRDGLTVLFGGLAAVIVVGWGLS
EAFPGRLADTWARFAWVVNHTTGENIQLRRVGIGEGPAWLDLVLDLSATAVATAALYTLF
RGVRSRRLRTDEEELRVRRLLAEHGEDDSLGYFATRREKSVVFSPNGRAAVAYRVLAGTS
VASADPIGDPDAWPDAVRSWLNEARTYGWTPGVLGASEHGAKVYADAGLRALEIGDEAVL
DVRDFSLAGPERRSVRQAVKRIERAGYTTKVRRHSEIPADEMAKLLLHAQQWRGAETERG
FSMALGRLGDPSDGRSVMVEAYDAKGQLRGMLSFVPWGRRGLSLDLMRRDRDAENGLNEY
MVAEVVAASSHLGAQRISLNFAMFRAVFSEGERIGAGPVLRAWRGVLSMASRFFQLESLY
RSNAKYGPDWEPRFLCYSSARRLPRVGIVAGALEGFVPTGRSGRALKLETVTDDFVAEVH
RIEANAATPAPKQVRRPDQVRVRMAKLDRLREAGIDPYPVGFAREDLLGDVVSKFGDLSP
DTRTGHRVRVAGRVLAMRNLGGLCFARVKDFSGEIQLMLDASVLDPGGWRRGVDLGDHVG
VSGQVVTSRRGELSVLVDEWTVTAKSLHPLPDKRKGLTDPETRVRQRYLDLAVNPDSTAM
LRMRSTVVRAVRERLHQGDYLEVETPMLQTVHGGANARPFITHINAYDMRMYLRIAPELY
LKRLCVAGVERVFELNRNFRNEGVDATHNPEFTMLEAYQAYADYNTMRTLTRELVQCAAE
AAYGAQVVRRPGADGQVVEYDISGDWPVIPVHEAVSAALGEKIDASTSVAELQRLCRAAG
VPVNEEAGHGDLVLKAHEHLVEGATVLPTFYTDYPTDVSPLTRQHRVDPRLAERWDLIAF
GSEVGTAYTELTDPLEQRRRLETQSLRAASGDVEAMELDEDFLLALEHGMPPTGGLGIGV
DRLLMMLTGASIRQTVLFPFVRPQG
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacccagtgagccgagtcgcgccgtggaaggcgagggcgggcggcatcgtcgcc
accctcgtgcagctcgcggccgtgttctcggtgatcctcctgctcgccggcggtgtgaag
gggccggtgctcaggacgggtgacatcgccttctcggccttgagcatcccgacgaacgcg
agcctcgtgatcgtcctgctgctcgtcgtcctcggcgccgcgctccgccgccgcaaacgc
gccgcgctttacacgctgctgctgttccaggtcggtggactggcggtgacgctggcgttc
caagccgcgctgctgtggtggcccgagctgctgaaactcggtccgtggcaggtccggcac
attccgcatcaggtgtgggtgctggccatcgccgacctgatctccctcggcatgatcgcg
ttcctgtggatcctgcgcccggcgttcccggccaggctcgcccccggcgcgtggcgcgat
ggactcaccgtcctgttcggcggcctggccgcggtcattgtcgtcggctggggcttgagc
gaagcctttcccggtcgtctcgccgacacctgggcacgcttcgcctgggtcgtcaaccac
acgaccggcgagaacattcagctgcgccgggtcggcatcggtgaagggcccgcttggctc
gatctcgtgctcgacctcagcgcgacagccgtcgcgactgccgcgttgtacacgctcttc
cgcggcgtgcggagccgtcgcttgaggacggacgaggaagaactgcgcgtacgccgcctt
cttgccgaacacggcgaagacgactcgctgggctatttcgccaccaggcgcgagaagagc
gtcgtcttctcgcccaacggccgcgccgccgtggcctatcgcgtgctcgcgggcaccagc
gtcgcgagcgcggaccccatcggcgatcccgacgcctggcccgacgccgtccgctcctgg
ctgaacgaagcgcgcacctacggctggacgcccggcgtgctcggcgcgagtgaacatggc
gcgaaggtctacgccgacgcgggcctgcgtgcgctggaaataggtgacgaagccgtcctc
gacgtccgtgacttcagcctggccggaccggaacggcgctcggtccgccaagccgtcaaa
cggatcgaacgggccggatacaccacgaaagtccgtcggcacagcgaaatcccggccgac
gaaatggccaagctcctgctgcacgcacagcagtggcgcggagcggaaaccgagcgcggg
ttctcgatggctctcggcaggctcggagatccgagtgacggccgcagcgtgatggtggag
gcgtacgacgccaagggtcagcttcgcggcatgctgtcgttcgtgccgtggggccgtcgc
ggcctgtccctcgacctgatgcggcgcgaccgcgacgccgaaaacggcctcaacgaatac
atggtcgcggaggtcgtcgcggcgagctcacaccttggcgcacaacggatttcactgaat
ttcgcgatgttccgcgcggtcttctccgagggggagcggatcggcgcgggcccggtgctg
cgcgcctggcgcggcgttctcagcatggcgtcgcgcttcttccagctggaatcgctctac
cggtccaacgccaagtacggccccgactgggagccgcgtttcctgtgctattcctcggct
cgacggctgcctcgggtcggcatcgtcgccggtgcgctcgaaggattcgttccgacaggc
cggtcgggacgagcactgaaactggagaccgtcaccgacgacttcgtcgccgaggtgcac
cgcatcgaagcgaacgcggccacccccgcgccgaaacaggtgcggcgccccgatcaggtc
cgggtgcggatggcgaagctggatcgcttgcgggaagcggggatcgatccctatccggtc
ggcttcgcccgggaggatctgctcggtgacgtcgtctcgaagttcggtgatctgagcccg
gacacccggaccggtcatcgggtccgggtcgcgggccgggtgctcgcgatgcgaaacctc
ggcggtctgtgcttcgcccgggtcaaggatttcagcggcgagatccagttgatgctcgac
gcctccgtgctcgacccgggcggctggcggcgaggcgtcgacctcggcgatcacgtcggc
gtgagcgggcaggtcgtgacatcacggcgcggtgaactttccgtgctcgtcgacgaatgg
accgttacggcgaagagcctgcatccgttgccggacaagcgaaagggcctcaccgacccc
gagacgcgggtgcggcagcgttacctcgacctagccgtgaacccggattcgacggcgatg
ctgcggatgcgctcgaccgtggtgcgcgcggtgcgggaacggctgcaccagggtgattac
ctcgaagtcgagacgccgatgctgcagacggtccacggcggcgccaacgctcgcccgttc
atcacgcacatcaacgcctacgacatgcggatgtacctgcggatcgcccccgagctgtac
ctgaagcggttgtgcgtggctggtgtcgagcgcgttttcgagctgaaccggaacttccgc
aacgaaggcgtcgacgcgacccacaaccccgaattcaccatgctggaggcgtaccaggcg
tacgccgactacaacacgatgcggacgctgacgcgggaactcgtgcagtgcgccgcggaa
gccgcgtacggcgcgcaggtcgttcgccgtccgggggcggacggtcaggtcgtcgagtac
gacatctccggcgactggccggtgatcccggtgcatgaagccgtttcggctgcgctcggg
gaaaagatcgacgcgagcacctcggtcgccgagctccagcggctgtgccgtgcggcggga
gtgccggtgaacgaggaggccgggcacggcgatctcgtgctgaaggcccacgagcacctg
gtcgaaggcgcgaccgtgctgccgaccttctacaccgactacccgaccgacgtctcgccg
ctgacccggcaacatcgagtggacccgcggctggccgagcgctgggacctgatcgcgttc
ggctccgaagtcggcacggcctacaccgagctgaccgacccgctcgaacaacggcggcgg
ctggagacccagtcgctgcgcgcggcgagcggggacgtcgaggcgatggagctggacgag
gacttcctgctcgcgctcgaacacggcatgccgccgaccggcgggctcggcatcggcgtc
gaccggctgctgatgatgctgaccggggcgtcgatccggcagacggtgctgttcccgttc
gtccgcccgcagggctag
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