Amycolatopsis sp. TNS106: CVV72_28985
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Entry
CVV72_28985 CDS
T10876
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
amys Amycolatopsis sp. TNS106
Brite
Enzymes [BR:
amys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CVV72_28985 (gyrB)
DNA replication proteins [BR:
amys03032
]
Prokaryotic type
DNA Topoisomerases
CVV72_28985 (gyrB)
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVV72_28985 (gyrB)
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Other DBs
NCBI-ProteinID:
QXV60632
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Position
complement(6358274..6360241)
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AA seq
655 aa
AA seq
DB search
MTENKSEYNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNSVDEAMAGYATK
VEVTLLADGGVRVVDDGRGIPVDMHPKEMKPTLEVVLTVLHAGGKFDSDSYAVSGGLHGV
GVSVVNALSTKLIAEVKRGGHSWRQVYTDQIPGELEDLGPAEDTGTTITFWADGDIFETT
TYNFETISRRLQEMAFLNKGLTLSLRDERVADEETEADASGQAARVKEKTYCYPGGLEDF
VKHINGSKDPIHASVISFEAKGTGLEVEVAMQWNNGFTPSVYTFANTINTHEGGTHEEGF
RAALTRVVNAYAREKKLLKEKDANLSGDDVREGLAAIVSIKLSEPQFEGQTKTKLGNSEA
KTFVQQTSNEWLADWFERNPTEAKTIINKSISSAQARMAARKARDLVRRKGALEIGGLPG
KLKDCRSTNPSECELYIVEGDSAGGSAKEGRDSMYQAILPIRGKIINVEKARIDRVLKNT
EVQSLITALGTGIHEEFDIEKLRYHKIVLMADADVDGQHITTLLLTFLFRFMPPLIEHGH
VFLSRPPLYKIKWPRQDPEYAYSDRERDAVIQAGVEAGRKLPKDDAIQRYKGLGEMNAEE
LWETTMDPANRLLGQVTLDDAAQADDLFSVLMGEDVEARRSFITRNAKDVRFLDV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagaacaagagcgagtacaacgcgtcgtcgatcacggtgctcgaaggcctcgaa
gccgtccgcaagcgtcccggcatgtacatcggttccaccggtgaacgcggcctccaccac
ctcgtccaggaggtggtcgacaactccgtcgacgaggcgatggccggttacgcgaccaag
gtcgaggttaccctgctggccgacggtggcgtgcgcgtcgtggacgacggccgcggcatc
ccggtcgacatgcaccccaaggagatgaagccgactctcgaggtcgtgctcaccgtgctc
cacgcgggcggcaagttcgacagcgactcctacgcggtctccggtggtctgcacggcgtc
ggcgtctccgtggtgaacgcgctctcgaccaagctgatcgccgaagtcaaacgcggcgga
cacagctggcggcaggtgtacaccgaccagatcccgggtgagctggaggatctcggcccc
gccgaggacaccggcaccacgatcaccttctgggccgacggcgacatcttcgagaccacg
acgtacaacttcgagacgatctcccggcgtctccaggagatggccttcctcaacaagggc
ctgaccctttcgctgcgcgacgagcgcgtcgccgacgaagagaccgaagcggacgcttcc
ggccaggcggcgcgggtcaaggagaagacctactgctacccgggtggtctcgaagacttc
gtcaagcacatcaacggcagcaaggacccgatccacgcgtccgtgatctccttcgaggcc
aagggcaccggcctcgaggtcgaggtcgccatgcagtggaacaacggcttcacgccgtcg
gtgtacaccttcgccaacacgatcaacacacacgagggcggcacgcacgaagagggcttc
cgcgccgcgctcacccgcgtcgtcaacgcgtacgcgcgcgagaagaagctgctcaaggag
aaggacgccaacctctccggtgacgacgtgcgcgaggggctcgccgcgatcgtctcgatc
aagctctccgagccgcagttcgaaggccagaccaagaccaagctgggcaacagcgaggcc
aagacgttcgtgcagcagacctcgaacgaatggctggccgactggttcgagcgcaacccc
accgaggcgaagacgatcatcaacaagtcgatctcctcggcgcaggcgcggatggccgcc
cgcaaggcgcgcgatctggtccgccgcaagggcgcgctggagatcggcgggctgcccggc
aagctcaaggactgccgctcgaccaacccgtcggaatgcgagctctacatcgtcgagggt
gactcggcgggcggttcggccaaggaaggccgcgactcgatgtaccaggcgatcctgccg
atccgaggcaagatcatcaacgtcgagaaggcccgtatcgaccgcgtcctcaagaacacc
gaggtccagtcgctgatcaccgcgctcggcaccggtatccacgaagagttcgacatcgag
aagctgcgctaccacaagatcgtgctgatggccgacgccgacgtggacggccagcacatc
accacgctgctgctcaccttcctgttccggttcatgcccccgctgatcgagcacggacac
gtgttcctctcgcgcccgccgctgtacaagatcaagtggccgcggcaagacccggagtac
gcctactccgaccgtgagcgcgacgccgtcatccaggcgggtgtcgaagccggccggaag
ctgccgaaggacgacgcgatccagcgctacaagggtctcggcgagatgaacgccgaagag
ctgtgggagaccacgatggacccggcgaaccggctgctcggccaggtcaccctggacgac
gccgcgcaggccgacgacctgttctccgtcctgatgggcgaggacgtcgaagcccgccgt
tccttcatcacgcgtaatgccaaggacgtgcgtttcctagacgtctag
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