Amycolatopsis sp. TNS106: CVV72_31140
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Entry
CVV72_31140 CDS
T10876
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03030
DNA replication
amys03430
Mismatch repair
amys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CVV72_31140
03430 Mismatch repair
CVV72_31140
03440 Homologous recombination
CVV72_31140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amys03032
]
CVV72_31140
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_31140
Enzymes [BR:
amys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CVV72_31140
DNA replication proteins [BR:
amys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CVV72_31140
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CVV72_31140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
DNAX_ATPase_lid
AAA_30
AAA_19
Mg_chelatase
AAA_16
Rad17
AAA_14
DnaX_C
Motif
Other DBs
NCBI-ProteinID:
QXV61015
LinkDB
All DBs
Position
6800076..6802124
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AA seq
682 aa
AA seq
DB search
MALALYRKYRPATFAEVVGQEHVTDPLRTALAAGRINHAYLFSGPRGCGKTSSARIMARS
LNCAKGPTPDPCGECNSCRNLAPEGPGSVDVTELDAASHGGVDDARELRDRAFYAPADSR
YRVFIIDEAHMVTTQGFNALLKIVEEPPEHLIFIFATTEPDKVLPTIRSRTHHYPFRLIP
PSSMRELLERNVAAEGAKVEPAVYPLVIRAGGGSARDTQSVLDQLLAGAGPDGVDYSRAV
SLLGVTDVALIDGMVDALAADDAAAVFGTVERLAEAGHDPRRFATDLLDRLRDLVMLRSV
PDAGERGLVAAPDDELKKMTEQAGKLEPATLSRYADIVHNGLLEMRGATSPRLVLELLTA
RMLLPSVAEGTDALLARLERLERRAVSAPAPVAAAPAPSAQAAQAAPVAQSAPVAPAGEP
VREFQRPSQRATAPAQQATPAPQAAPQPTARPEPVAERPAPQRPSAPTPPPAELAVASGG
AAAPAAPASDVDGIRGRWPQVLAAIRKVPGGRSTEAMLTQASVVSVEGNAVTLTHSAEPL
ARRLSEPHNAERVATAFKEVFGGDWQVRCVHGAAQARQATAPKAAPQPPAPERSFTRRSV
EAPAAPPEPPAPKPEPQRPKVTTSEPDIPLPPEPVEEDEDLYNEDASPAPPPPPLPPEQD
PEEIARKLLADHLNARPLDERK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtggcattagctctctaccgaaagtaccgtccggctaccttcgccgaggtcgtcgggcag
gagcatgtgaccgatccgctgcgtacggcgctggccgccgggcgcatcaaccacgcctac
ctcttctccggcccgcgtggctgcggcaagacgtccagcgcccgcatcatggcgcggtcg
ctgaactgcgcgaagggcccgacgccggatccgtgcggcgagtgcaattcgtgccgcaac
ctcgcgcccgaaggccccggcagcgtcgacgtcaccgaactcgacgccgccagccacggt
ggcgtcgacgacgcccgcgagctgcgggacagggccttctacgccccggccgactcgcgc
tatcgcgtcttcatcatcgacgaggcgcacatggtcaccacacagggcttcaacgccctg
ctgaagatcgtggaagagccgccggagcacctgatcttcatcttcgcgaccaccgaaccg
gacaaggtgctccccaccatccggtcgcggacgcaccactaccccttccggctgatcccg
cccagttccatgcgcgagctgctggaacgcaacgtcgccgccgaaggcgcgaaggtcgag
cccgcggtgtacccgctggtcatccgcgcgggcggcggttcggcgcgggacacgcagtcg
gtgctggaccagctgctggcgggggccgggccggacggcgtcgactactcgcgcgcggtg
tcgctgctgggtgtcaccgacgtggcgctcatcgacggcatggtcgacgcgctggccgcg
gacgacgccgccgcggtgttcggcaccgtcgagcggctcgccgaggccgggcacgacccg
cgccggttcgccaccgacctgctcgaccgcctgcgcgacctggtgatgctgcgttcggtg
ccggacgcgggtgaacgcggcctggtcgccgcgccggacgacgagctcaagaagatgacg
gagcaggcgggcaaactggagcccgcaacgctctcgcgctacgccgacatcgtccacaat
ggactcttggagatgcggggcgcgacctcgccgaggctggtgctggaactgctcacggcg
cggatgctgctgccgtcggtcgccgagggcaccgacgcgttgctcgcccggctcgaacgg
ctcgaacgccgtgccgtttcggctccggcgcccgtcgccgccgctcccgcgccgtccgct
caagccgcacaggcggccccggtggcgcagtccgcccctgtcgctccggcgggtgagccc
gtgcgcgaattccagcggccttcgcaacgagccaccgcgcccgcccagcaggccacaccg
gctccgcaagccgcaccacagcccaccgcgcggcccgagccggtcgccgaacggcccgcc
cctcagcggccttccgcgcccaccccgcctccggccgagctcgccgtggcttcgggtggc
gcagcagcgcccgcagcgcccgcatcggatgtggacgggatccgcggccgctggccgcag
gtactcgccgcgatccgcaaggtcccgggcggccgcagcaccgaagcgatgctcacgcag
gcgagcgtggtgagtgtcgagggcaacgccgtcaccctcacccacagcgccgagccgctg
gcccgccggctttccgagccgcacaacgcggagcgcgtcgcgaccgcgttcaaggaggtc
ttcggcggcgactggcaggtccgctgcgtccacggcgccgcacaggcccggcaggccacg
gcgcccaaggccgcgccgcagccgccggcgcccgagcggtccttcacgcgccggtccgtc
gaagcgcccgccgcccctcctgagcctcccgcgccgaagccggagccccagcggccgaag
gtgacgacctccgagccggacatcccgctcccgcccgagccggtcgaggaggacgaggac
ctctacaacgaggacgcgagccccgccccgccgcctccgccgctcccgcccgagcaggac
ccggaagagatcgccaggaagctgctcgccgaccacctcaacgcccgcccgctcgacgag
cgcaagtag
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