Amycolatopsis sp. TNS106: CVV72_33010
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Entry
CVV72_33010 CDS
T10876
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVV72_33010 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amys03019
]
CVV72_33010 (groL)
03110 Chaperones and folding catalysts [BR:
amys03110
]
CVV72_33010 (groL)
03029 Mitochondrial biogenesis [BR:
amys03029
]
CVV72_33010 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amys04147
]
CVV72_33010 (groL)
Enzymes [BR:
amys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CVV72_33010 (groL)
Messenger RNA biogenesis [BR:
amys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CVV72_33010 (groL)
Chaperones and folding catalysts [BR:
amys03110
]
Heat shock proteins
HSP60 / Chaperonin
CVV72_33010 (groL)
Mitochondrial biogenesis [BR:
amys03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CVV72_33010 (groL)
Exosome [BR:
amys04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CVV72_33010 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CVV72_33010 (groL)
Exosomal proteins of breast cancer cells
CVV72_33010 (groL)
Exosomal proteins of colorectal cancer cells
CVV72_33010 (groL)
Exosomal proteins of bladder cancer cells
CVV72_33010 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MukB_hinge
CbiA
Motif
Other DBs
NCBI-ProteinID:
QXV61341
LinkDB
All DBs
Position
7187275..7188903
Genome browser
AA seq
542 aa
AA seq
DB search
MAKLIAFDEDARRGLERGLNTLAEAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
AAVEAITEQLHKAAVQIETKEQIAATASISAADRTIGELIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYISGYFVTDPERQEAELEDPYVLLFGSKISTVKDVLPLLEKVIQ
SGKPLLIIAEDVEGEALATLIVNKMRGTFKSVAVKAPGFGDRRKAILQDIAILTGGQVIS
EDVGLKLENADLSLLGKARKAVITKDETTIVEGAGDADQIQGRVNQIRAEIDNSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
AEAAFAGLKLEGDEATGANIVKVAVEAPLKQIAINAGLEGGVVAEKVKSLPQGHGLNAAT
GVYEDLLAAGVPDPTKVTRSALQNAASIAALFLTTEAVVADKPEKASAAPADPSGGMGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactgatcgcgttcgacgaggacgcccgccgcggtcttgagcgcggcttgaac
accctcgccgaagccgtcaaggtgaccctcggcccgcggggccggaacgtcgtgctcgaa
aagaagtggggcgcgccgacgatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggacccgtgggagaagatcggggccgagctcgtcaaggaagttgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggctctcgtccgc
gagggtctgcgcaacgtcgccgccggggccgaccccatcagcctgaagcgcggcatcgag
gcggccgtcgaggccatcaccgagcagctgcacaaggccgccgtccagatcgagaccaag
gagcagatcgccgccaccgcgtcgatctccgccgcggaccgcaccatcggtgagctcatc
gccgaggcgctggacaaggtcggcaaggaaggcgtcgtcaccgtcgaggagagcaacacc
ttcgggctcgagctcgagctcaccgagggtatgcgcttcgacaagggctacatctccggt
tacttcgtgaccgacccggagcgtcaggaagccgagctcgaggacccgtacgtcctcctc
ttcggctccaagatctccaccgtcaaggacgtcctgccgctgctggagaaggtcatccag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctggccaccctc
atcgtcaacaagatgcgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgcaaggcgatcctgcaggacatcgcgatcctgaccggtggccaggtcatctcc
gaggacgtcggcctcaagctggagaacgcggacctttccctgctgggcaaggcgcgcaag
gccgtcatcaccaaggacgagaccaccatcgtcgagggtgcgggcgacgccgaccagatc
cagggtcgcgtcaaccagatccgcgccgagatcgacaactcggactcggactacgaccgc
gagaagctccaggagcggctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtcgctctcatccaggcc
gccgaggccgccttcgccggtctgaagctcgagggcgacgaggccactggtgccaacatc
gtcaaggtcgccgtcgaggcgccgctcaagcagatcgcgatcaacgccggcctcgaaggc
ggcgtcgtggcggagaaggtcaagtccctcccgcagggccacggcctcaacgccgccacc
ggtgtctacgaggacctgctcgccgccggcgtgccggaccccacgaaggtcacccgctcc
gcgctgcagaacgccgcttccatcgcggcgctgttcctgaccaccgaagccgtcgtggcg
gacaagccggagaaggcctcggccgctcccgccgacccgtccggtggcatgggcggcatg
gacttctga
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