Amycolatopsis sp. TNS106: CVV72_33055
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Entry
CVV72_33055 CDS
T10876
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03420
Nucleotide excision repair
Brite
Enzymes [BR:
amys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVV72_33055
Transcription machinery [BR:
amys03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CVV72_33055
DNA repair and recombination proteins [BR:
amys03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CVV72_33055
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QXV61349
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Position
complement(7197880..7199526)
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AA seq
548 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDNSQADDARIAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALTTYSRFPVPQPLLIDIVDTMGRFGRLQIANHPAHGLVMSTIDRAVLEEIL
RHKKISPMLGARIDEDTVIVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIDLAEVDW
ELRDYQRKAAEAFWAGGSGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTVAGRQWKRE
LVARTSLTEEEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYKHLDLFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAP
AECTEVRVTLTDAERLAYATAEAEERYKLAATADTKTKVIKSLVDRHPGEPTLVIGAYLD
QLEMIGDELDAPVIQGATRNKEREELFDAFRRGEIRTLVVSKVANFSIDLPEASVAIQIS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSVVSRDTVDTEYAAHRQRFLAEQGYAYRIVD
ADDLLRPM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatggcccgctgatcgtccaatccgacaagaccgtgctcctcgaggtcgacaac
agccaggccgacgacgcgcggatcgccatcgcgccgttcgccgaactggaacgcgcgccc
gagcacgtccacacctaccggatcacgccactggcgttgtggaacgcccgcgcggcgggc
cacgacgccgaacaggtcgtcgacgcgctgacgacgtactcgcgcttccccgtcccccag
ccgctgctcatcgacatcgtggacacgatgggccggttcgggcggctgcagatcgcgaac
cacccggcgcacggcctggtgatgtcgaccatcgaccgcgcggtgctggaggagatcctc
cgccacaagaagatcagcccgatgctgggcgcccgcatcgacgaggacaccgtcatcgtg
cacccgtccgaacgcgggcggctcaagcaggcgctgctgaaggtcggctggcccgccgag
gacctcgccggttacgtcgacggcgaggcgcacccgatcgacctcgccgaggtcgactgg
gagctgcgcgactaccagcgcaaggccgccgaggcgttctgggcgggcggctccggcgtc
gtcgtgctgccgtgcggcgcgggcaagacgctggtcggcgccgcggccatggcgcacgcg
aaggcgaccacgctgatcctggtgacgaacaccgtcgccggacggcagtggaaacgggag
ctggtcgcgcggacctcgctcaccgaggaggagatcggcgaatactccggggagaagaag
gagatccggccggtcaccatcgcgacctaccaggtggtcacgcgcaagaccaagggtgaa
tacaagcatctggacctgttcgattcgcgggattggggcctggtcgtctacgacgaggtc
caccttctgcccgcgccggtgttccggatgaccgcggacctgcagtcgcggcgccggctc
gggctgaccgcgaccctggtgcgcgaggacgggcgcgagggcgacgtgttctccctgatc
ggcccgaagcggtacgacgtcccgtggcgcgacatcgaggcgcagggttggatcgcgccg
gcggaatgcaccgaggtccgggtgacgctgacggacgccgaaaggctcgcgtacgcgacc
gccgaggccgaggaacggtacaaactggcggcgaccgcggacaccaagaccaaggtgatc
aaatcgctggtcgaccggcatcccggcgagccgaccctggtcatcggggcctatctcgac
cagctggagatgatcggcgacgaactcgacgcgccggtgatccagggcgcgacacggaac
aaggaacgcgaagaactgttcgacgcgttccgtcgcggagagatcaggaccctggtcgtt
tcgaaggtcgcgaacttctcgatcgacctgccggaggcgtcggtcgccatccagatctcc
gggacgttcggctcgcggcaggaagaggcacagcggctgggacggctgctccggcccaag
ggcgacgggcggcaggcacatttctactcggtcgtctcgcgggacaccgtggacacggag
tacgcggcgcaccggcagcggttcctggcggaacaggggtacgcgtaccggatcgtggac
gcggacgacctgctgcgccccatgtag
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