Amycolatopsis sp. TNS106: CVV72_34840
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Entry
CVV72_34840 CDS
T10876
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVV72_34840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_34840
Enzymes [BR:
amys01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CVV72_34840
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVV72_34840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QXV61665
LinkDB
All DBs
Position
7566990..7567682
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AA seq
230 aa
AA seq
DB search
MRFRSLAELDAEVVGCRACPRLVAWREEIAVVKRAAFAGETYWARPVPGFGPPDASLAIV
GLAPSAHGANRTGRLFTGDPSGDVLFKALHRVGVASQPTSTHIGDGLELRGTRMVSPVRC
APPANKPTPEERETCRSWLAAELALLKPTLKAVVVLGAFGWQALLPVLAEAGWPVPAPRP
KFGHGTELELGDLRLFGCYHVSQRNVQTGRLTLDMVCDVLASATSAAGLN
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaggttccgctcgctcgccgaactcgacgccgaggtcgtcggctgccgcgcctgcccg
aggctggtcgcgtggcgcgaggagatcgccgtggtcaaacgcgcggccttcgccggtgag
acctactgggcccggccggtgcccggcttcggcccgccggacgcgtcgctggcgatcgtc
ggcctcgccccttccgcccatggcgcgaaccggaccggccgtctgttcaccggcgacccg
tccggtgacgttctcttcaaggcgcttcaccgggtcggagtcgcgtcacagccgacgtcg
acccatataggtgacggtctcgaactccgagggacccggatggtctctccggtgagatgc
gcgccacccgccaacaagcccacacctgaggaacgggaaacctgccgatcgtggctcgcg
gcggagctcgcgttgttgaaaccgacgctgaaggccgtcgtggtgctcggcgccttcggc
tggcaggcgctgctgccggtgctcgcggaggccggctggccggtgcccgcgccacgcccg
aagttcggccacggaaccgaactggaactcggcgacctgcgccttttcggctgttatcac
gtgtcgcagcgcaatgtccagaccggccgcctgacccttgacatggtgtgcgacgtcctg
gcctccgcgacctcggcggccggcctgaactga
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