Amycolatopsis sp. TNS106: CVV72_35280
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Entry
CVV72_35280 CDS
T10876
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amys Amycolatopsis sp. TNS106
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amys03400
]
CVV72_35280
DNA repair and recombination proteins [BR:
amys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVV72_35280
Archaeal homologous recombinant proteins
CVV72_35280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
TsaE
Spectrin_Anc-1
NACHT
AAA_21
nSTAND3
AAA_22
Med9
Motif
Other DBs
NCBI-ProteinID:
QXV61742
LinkDB
All DBs
Position
7656351..7659302
Genome browser
AA seq
983 aa
AA seq
DB search
MRLHRLEVAAFGPYAGREVVDFDVLGADGLFLLHGDTGAGKTTLLDAIAFALFGTVPGAR
GEVKRLRCDLAEPDQVTEVVLELTVQGQRMRIARNPEYQRPKRRGEGMTLQQAKAVLSWV
GTVPAGHVAEGITRIDEVARTVERLIGMTHEQFFQVVLLPQGEFARFLRANTAEREELLE
RLFGTERFSDVENWFANLRAERGRELQARQQTLREWVARFAQVAGQEAPEEGQSEWVGEV
LAESARRVAEAQERDTKARAAAKKAEVAWQENRATAERIRRVRTAYTRLSVIAEQADQRA
EWAEEVEAAHRAAAVVAEADLLDRRLDQLAEAEATEALRAQEVPDAAESPAVELRARAGE
LREEAGALAELVAESEQQQRDLVRREQLNAAADKAKKQAEDFAAELGAAPEKVASLRAEA
AAAAEAEAKLDGARARVDELTALARDAEEVPKTGQAVERARAAVSEAVDGHQQARQHRLD
LRERRLEGMAAELAAGLHAGEDCPVCGSAEHPSPATHTGGLVDPADERRAEAAEQQAHAR
REKTTAALQEAENRLTILVERLGEHTAETLRARLAEARDLVATLSEAARRKPALETRILE
LERKIELLTEQHGAAERRAVEVATEVRGLTERLAERERRLEAARGEFADVAARRRHLLGF
ATRLDALAEARLAVGGARERRDEQAKLVKEALRAKGFANLDEMRAAARPDEQITKLEASL
ADAKVMERAAREELAQPELFGISPEDEIDVAASADAAQETRAEAEQAFAALRTAKTRHTD
LTGLAERMTSLMAELAPVEEGYLELKALAEVVNGRGQNARKMSLRSYVLAARLEEVAVAA
TARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDYSGTIRPAKTLSGGESFLASLSLA
LGLADVVAAETGGALLDTLFIDEGFGTLDAETLDIVMNILDELRAGGRVVGLVSHVEELR
QRIPTRLRIRKSRTGSSVEIHAA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcaccggttggaggtcgccgctttcggcccgtacgcgggccgtgaggtggtg
gacttcgacgtgctcggcgccgacgggctgttcctgctgcacggtgacaccggcgcgggg
aagacgacactgctcgacgcgatcgcgttcgcgttgttcggcaccgtccccggcgcgcgg
ggcgaggtcaaacggctgcgctgcgatctcgccgagcccgaccaggtcaccgaggtcgtc
ctggaactgaccgtgcagggccagcggatgcggatcgcgcgcaaccccgagtaccagcgt
ccgaagcgccgtggcgaagggatgaccctccagcaggcgaaggcggtgctgagctgggtc
ggcaccgtacccgccggacacgtcgccgagggcatcacgcggatcgacgaggtcgcgcgc
acggtcgagcggctcatcggcatgacgcacgagcagttcttccaggtggtgttgctgccg
cagggcgaattcgcgcgcttcctgcgcgcgaacacggccgagcgcgaggaactgctggag
cggcttttcggcaccgagcgtttctccgacgtcgagaactggttcgcgaatctgcgggcc
gaacgcggccgcgagttgcaggcgcggcagcagacactgcgggagtgggtcgcgcggttc
gcgcaggtcgcggggcaggaagcgcccgaggaagggcagtcggagtgggtcggcgaggtg
ctcgccgagtcggcacggcgcgtcgccgaagcacaggagcgcgacacgaaggcccgcgca
gcggccaagaaggctgaagtggcctggcaggagaaccgggccaccgccgaacggatccgc
cgggtgcgcacggcgtacacgcggctgtcggtgatcgccgagcaggcggaccagcgcgcg
gagtgggcggaagaggtcgaggcggctcatcgcgcggcggctgtcgtcgcggaggcggat
ctccttgaccgcagactggatcagctcgccgaggccgaggccaccgaagcgctccgggct
caggaagtgccggacgcggcggagagtccggccgtcgagcttcgcgctcgcgccggcgag
ctgcgggaagaggcgggggcactcgccgaactcgtggcggaaagcgagcagcagcaacgg
gatctggtccgccgcgagcagctgaacgccgccgccgataaggcgaagaagcaggctgag
gacttcgccgccgagctgggcgcggcgccggagaaggtcgcgtcgttgcgagccgaagcg
gccgcggccgccgaagccgaagcgaagctcgacggcgcccgcgctcgtgtcgacgagctg
accgcgctggctcgcgacgccgaagaggtacccaagacagggcaggccgtcgagcgggca
cgcgctgcggtcagcgaagccgttgacggccatcagcaagcccgccagcaccggctggat
ctgcgggaacggcgtctcgaaggaatggcggccgaactcgccgccggtctccacgcgggc
gaggactgcccggtctgcgggtcggcggaacacccgtcgccggcgacgcacaccggcggt
ttggtcgatccggcggacgaacgccgcgccgaagccgcggagcagcaggcgcacgcgcgg
cgtgagaagacgacagccgcgttgcaggaggcggaaaaccgcctgaccatcctggtcgag
cggttgggagagcacaccgccgagacattgcgggccaggctcgccgaagcgcgcgacctg
gtcgccacgctgtcggaggcggctcgccggaagcccgctctcgagacgcggatcctcgaa
ctggaacggaagatcgagctgctgaccgagcagcacggggcggccgaacgccgcgcggtc
gaggtcgcgaccgaggtgcgcgggctgaccgagcggctggccgagcgcgaacgccggttg
gaggccgcgcgcggcgagttcgccgacgtcgccgcccgtcggcgtcatctgctcggcttc
gcgacccgcctcgacgcgttggccgaagcgcggctggccgtcgggggtgcccgcgaacgc
cgtgacgagcaagcgaaactggtcaaggaagccttgcgagccaagggtttcgcgaacctc
gacgagatgcgcgccgcggcgcggccggacgagcagatcacgaaactggaagccagcctc
gccgacgcgaaggtgatggaacgggccgcccgcgaggaactcgcgcagcccgagttgttc
ggcatctcgccggaggacgagatcgacgtcgccgcttcggcggacgcggcgcaggagacg
cgagccgaggccgagcaggctttcgcggcactgcggacggcgaagacacggcacacggac
ctgaccgggctggccgagcggatgacgtccttgatggcggaactggcgccggtcgaagag
ggttatctcgaactgaaggcgttggccgaggtggtcaacggacgcgggcagaacgcgcgg
aagatgtcgctgcgctcgtacgtcctcgccgcgaggctggaggaggtcgcggtcgcggcg
acggctcgcctgcggacgatgagccagggccgctattccttcgtgcattccgacgcggcc
ggggcgcggggcacccgcggcgggctcggcctcgacgtgctcgacgactactccggcacc
atccggcccgcgaagacgctttcgggcggcgagtccttcctcgcgtcactctcgttggcg
ctgggcctagctgacgtcgtcgccgccgaaaccggtggagcgctgctggacacgctgttc
atcgacgagggcttcggcacgctggacgccgagacgctcgacatcgtcatgaacatcctc
gacgagcttcgcgccggcggtcgtgtggtcgggctggtctcgcacgtcgaggagctgcgg
cagcggatcccgacgcggctgcggatccggaagtcgcgtacgggctcctcggtggagatc
cacgccgcctga
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