Amycolatopsis sp. TNS106: CVV72_38855
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Entry
CVV72_38855 CDS
T10876
Name
(GenBank) hypothetical protein
Organism
amys Amycolatopsis sp. TNS106
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Ge1_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Cytochrom_D1
Marek_SORF3
DUF6377
Motif
Other DBs
NCBI-ProteinID:
QXV63466
LinkDB
All DBs
Position
8390916..8394272
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AA seq
1118 aa
AA seq
DB search
MLRAGLLPALAETSVTLLMTPGSRPLQECAVQFGAALGLPPGGLLAEFTEHPRNLGLAAR
QLVADRDGDVVLVVDQFEEVFTLCQDADERAAFLSALVTATTGPESRTRVVLGIRTDFYT
HCARHPELVEAMQDAQILVGPMSTEELRQAISRPAIDAGYRVENALVSRLVADATGQPGV
LPLLSHALLETWRRRHGNTLTLTGYESTGGIERSVAQTSEHTFTALTEHQQRLANQIFLR
MTALGEGTEDTKRRITRDEVDADDPDVAVVLDRLASSRLVTLDDNGIEIAHEALIRGWPR
LREWLAEDREGLRVHRQLTEATDAWESVGRDDGWLYRGARLAIAREWAAEHDSALSQRER
RFLDASAAIENHEQAVARRRTRRLRQLVALLAVLLVLATAAMAYAVRAEQTATSQRNSAL
AQKVAGQAIEMRTTNPALAAQLALAAYRVDPSVDTRGSVLGMFESPYSTRVRGHGHRVNA
TALRGDGQVMVTGSWDHTAKLWDIRDPHRPNELATLSGHTENVNSVSFSADGTTVATAGW
DKTARLWNVADPAKPGPGVLVGEHPSRVNAVAFSPKAAVLATSDGDGTVRLFDVRDPAKP
VLAATLPGHTGNVNGLAYAPDGRTLVSTGADKTARLWDVADPLKAKPLGVVSGHTAGVHS
ATFSPDGRTLATASIDQTARLWNVADPMAPSPLGTTAAHKTIVRSVAFSPDGTTLATTGF
DRAARLWDVTDPAKPREKPALVGHTAAVVWAVFSPDGRTLVTASDDQTVRMWDLPGPAIS
GPARSACRAVFSSDGKLLATGSQDGVVRLVDVSDTRNPREVGKVAGFGQGVCGLAFSPDG
RTLAAGSWDHTMRLIDVTDPRKPVDAGVFYRPENEIDPVAFSPDGRTLATAGSGHTVKLW
DVADIRRPVELATLTGHEDDVHSLAFGPDGRTLLSGGWDHTARLWDVSMAKAPKPLSVLK
GHSDTVFSVAYSPDGKLAATGSADRTGRLWDVTNPAAPREAALLAGHTDNVISVAFSGDG
KTLATGSYDRSVRLWDVSDPGSVRESANLTDDVDRVNAVAFAPDGHTLAGSVADGSVRLW
ETSPERAAERICATVYPRITAGEWEQHLPGLDYRPPCP
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
ttgctccgggcaggtctcctcccggcgctggccgagacctccgtcacgctgctgatgacc
cccggatcgcggccgctccaggagtgcgccgtccagttcggcgccgccctcgggctcccg
cccggagggctgctcgccgagttcaccgagcatccgcgcaacctcggcctcgccgcccgt
cagctggtcgccgaccgcgatggcgacgtcgtgctggtcgtcgaccagttcgaggaggtc
ttcaccctctgccaggacgccgacgaacgggcggccttcctgtccgcgctggtcaccgcg
accaccgggccggagagccggaccagggtcgtcctcggtatccgcaccgacttctacacc
cattgcgcacggcatcccgagctggtcgaggccatgcaggacgcgcagatcctcgtcggc
ccgatgagcaccgaggagctgaggcaggccatctcgcggccggcgatcgacgccggatac
cgcgtcgagaacgcgctggtctcgcggctcgtcgccgacgcgaccgggcagcccggcgtg
ctgccgctgctctcgcacgcgctgctggagacctggcgccgccgccacggcaacaccctc
accctcaccggctacgagtccaccggcgggatcgaacgctcggtcgcgcagacctccgag
cacaccttcaccgcgctgaccgaacaccagcagcggctcgcgaaccagatcttcctgcgg
atgaccgcgctcggtgaaggcaccgaggacaccaaacgccgcatcacccgcgacgaggtg
gacgccgacgacccggacgtcgccgtcgtgctggacaggctggcgtcttcgcggctggtc
acgctcgacgacaacggcatcgagatcgcgcacgaggcgctgatccggggctggccgcgc
ctgcgcgaatggctggccgaggaccgtgaaggcctgcgcgtgcaccgccagctcaccgag
gcgaccgacgcctgggaatccgtcggccgcgacgacggctggctctaccgcggcgcgcgg
ctggccatcgccagggagtgggcggcggagcacgacagcgcgctttcccagcgtgaacgc
cggttcctcgacgcgagtgccgcgatcgagaaccacgagcaggccgtcgcccggcgccgc
acccggaggctgcgtcagctggtcgcgctcctggccgtcctgctggtgctggcgacggcc
gcgatggcgtacgccgtccgtgccgagcagaccgccaccagccagcgcaacagcgcgctc
gcgcagaaggtcgccgggcaggccatcgagatgcggacgacgaatccggcactggccgcg
caactcgcgctggcggcgtaccgcgtcgatccgagtgtggacacccgcggcagcgtgctc
gggatgttcgagtcgccgtactcgacccgggtccgcgggcacggccaccgcgtcaacgcg
accgccctgcgcggcgacggacaggtgatggtcaccggcagctgggaccacacggccaag
ctgtgggacatcagggatcctcatcgcccgaacgagctggccacgctctccgggcacacc
gagaacgtcaactcggtgtccttcagcgccgacggcaccacggtcgcgacggcgggctgg
gacaagaccgcgcggctctggaacgtcgccgatccggcgaaacccgggccgggcgtcctg
gtcggggagcatcccagccgggtcaacgcggtggcgttcagcccgaaggcggcggtgctc
gcgacctcggacggcgacggcacggtgcgcctgttcgacgtccgcgatcccgcgaaaccg
gtgctggcggccactctccccgggcacaccggcaacgtcaacggtctcgcctacgccccc
gacgggcggacgctcgtctcgaccggcgccgacaagaccgcacggttgtgggacgtcgcc
gacccgctcaaggccaagcccctcggcgtggtgagcgggcacaccgccggggtccactcc
gcgacgttcagcccggacggccggacgctcgccaccgcgagcatcgaccagaccgcgcgc
ctgtggaacgtcgccgacccgatggcgccgtcgccgctggggacgacggccgcgcacaag
accatcgtgcggtccgtggcgttcagtccggacgggacgacgctggccacgaccggtttc
gaccgcgccgcccggctgtgggacgtgaccgatccggcgaaaccgcgcgagaaacccgcg
ctcgtcgggcataccgcggccgtggtctgggcggtcttctccccggacggccgcaccctc
gtgaccgcgagcgacgaccagacggtgcggatgtgggatctgccgggtcccgcgatcagc
ggtccggcgaggtcggcctgccgcgcggtcttcagctccgacgggaagctgctggccacc
ggcagccaggacggcgtggtgcgcctggtcgacgtctccgacacccggaacccgcgtgag
gtgggcaaggtcgcgggcttcggccagggcgtctgcggtctcgcgttcagtccggacggg
cggacgctcgccgccggctcctgggaccacaccatgcggctgatcgacgtcaccgatccg
cgcaagccggtcgacgcgggcgtcttctaccgcccggagaacgaaatcgacccggtcgcg
ttcagcccggacggccggacgctcgcgaccgcgggcagcgggcacaccgtgaagctgtgg
gacgtcgccgacatccggcggccggtcgaactcgcgaccctcaccgggcacgaggacgac
gtccattcgctcgcgttcggccccgacggccgcaccctgctcagcggcggatgggaccac
accgcccggctgtgggacgtttcgatggcgaaggcgccgaaaccgctgtcggtgctgaag
ggacactccgacacggtgttctcggtcgcctacagcccggacggcaaactcgccgcgacc
ggcagcgccgatcgcaccggccggctgtgggacgtgacgaatccggcggccccgcgggag
gcggcgctgctggccgggcacaccgacaacgtcatctcggtcgccttcagcggggacggg
aagactctcgcgaccggcagctacgaccggtccgtgcgactatgggacgtctccgatccg
ggatcggtccgcgaatcggcgaacctgaccgacgacgtcgaccgggtcaacgccgtggcg
ttcgccccggacggccacaccctcgcgggctcggtcgcggacggcagcgtgcggttgtgg
gagaccagtcccgaacgggcggccgaacgcatctgcgcgacggtgtacccgcggatcacg
gcaggcgagtgggaacaacacctgccggggctcgattaccggcctccgtgcccgtga
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