Amycolatopsis sp. TNS106: CVV72_39440
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Entry
CVV72_39440 CDS
T10876
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
amys Amycolatopsis sp. TNS106
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amys03036
]
CVV72_39440 (smc)
Chromosome and associated proteins [BR:
amys03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CVV72_39440 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QXV62474
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Position
8508567..8512166
Genome browser
AA seq
1199 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVLDALRWVMGTQGAKDLRGGK
MEDVIFAGTAGRAPLGRAEVTLTIDNADGALPIEYSEVSITRRMFRDGASEYEINGDRCR
LMDVQELLSDSGIGREMHVIVGQGQLSAILESKPEERRAFIEEAAGVLKHRKRKEQTLRK
LANMQGNLDRLGDLTTELRRQLKPLGKQAEIARKAQWVQSELRDARLRLFAHDLVTQREG
IAKEEADERVARQRRAEVEQALEIVAAEEAELEASLAEDAPKLAAAQETWYKLSALTERL
RGTVRLALERQRHLSSDVQQASTGRDPDELLAEAEQVAEREQELNEAVAEARMVLSETVQ
RREQLEHLVQAAERAHMAAVRAIADRREGLAKLSGQVEALRSKNGATSDEIDRLTVSLEE
AAERAEIAVEELEEAKAAGGVEESDDSDLQAHHDRAVEANNAAKARVEELVKAERAAERE
IASEKARVEALSMGLRRKDGAGALLGAQHELPGLLGSVAALLTVEAGHEVALAAALGPVA
DAVAVNGGEDALAALKFLKDNDSGRAGILLGGLESTVDTSAWPSLPEGARWAREVVTAPP
ALRSAVEHALDRVAIVDGLESARRLVEVYPEVSTVTPEGDVFGARWAVGGSARSESVIEV
QAAVDEASDRLSAAERALERTAAELEGARAGQAARREEVGRAKEALGDAKVRKARSSERL
NRMQQAARAAQAEMDRLSNQRAKVEQSREEALRQLAELEERLAAVADQEVDEDPDTAERD
QAAEDLGTVRQEEMESRLALRTAEERARSIQGKAESLRRAAHAERQARERAEKSRAARKR
GAEIANAVVNGGEIALERIEVSVQRAAHERDEAQAQRQSRETALTQVRSKVRELTGELEK
LTDAVHRDEVLRAEQRLRLEQLETKIAEDFGIGLEDLVSEYGPDVPVPPSAGEMAEYEAA
KERGEDVTPPPPMPFDRDTQARRAKRAEKDLSLLGKVNPLALEEFAALEERYKFLSTQLE
DLKDTRKDLEAVIKQVDEKILEVFASAYEDVAREFETVFSVLFPGGEGRMVLTQPNDLLS
TGVDVEARPPGKKVKRLSLLSGGEKSLVAVGMLVAIFRARPSPFYVMDEVEAALDDTNMR
RLIGLLEQLRDSSQLIIITHQKPTMEIADALYGVSMQGDGITKVISQRLRTSEEELVTS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctgaagagcctgacgctcaagggcttcaagtccttcgcctcggcgacgacgttg
cgtttcgagccgggcatcacctgcgtggtcggaccgaacgggtccggcaagtcgaacgtc
ctcgacgcgctccgctgggtcatgggcacccagggcgcgaaggacctgcgcggcggcaag
atggaggacgtcatcttcgccgggaccgccggccgtgccccgctcgggcgcgccgaggtc
accttgaccatcgacaacgccgacggcgcgctgcccatcgagtactccgaggtctcgatc
acccgccggatgttccgcgatggcgcgagcgagtacgagatcaacggcgaccgctgccgc
ctgatggacgtgcaggaactgctgtcggactccggtatcggccgcgagatgcacgtcatc
gtcgggcagggtcagctatcggccatcctcgaatcgaagcccgaggagcgccgcgccttc
atcgaagaggccgcaggtgtcctcaagcaccgcaagcgcaaggaacagaccctgcgcaag
ctcgcgaacatgcagggcaacctcgaccgcctcggcgacctcaccaccgagctccgccgc
cagctcaaaccgctgggcaagcaggccgagatcgcccgcaaggcgcagtgggtgcagtcc
gagctgcgcgacgcgcggttgcggctgttcgcccacgacctggtcacccagcgcgaaggc
atcgccaaggaagaggccgacgagcgcgtcgcccgtcagcggcgcgccgaagtcgagcag
gccttggagatcgtcgccgccgaggaggccgagctcgaagcttcgctggccgaggacgcg
ccgaagctggccgccgcgcaggagacctggtacaagctttccgcgctgacggagcggttg
cgcggcaccgtgcggctcgctctggagcgtcagcgccacctgtcgtccgacgtgcagcag
gcgagcaccggccgcgaccccgacgagctgctcgccgaggccgaacaggtcgccgaacgg
gagcaggagctcaacgaggccgtcgccgaggcgcgcatggtgctttcggagaccgtccag
cggcgtgagcagctcgaacacctcgtccaggccgcggagcgcgcgcatatggccgccgtc
cgcgcgatcgccgaccgccgggaagggctcgcgaagctctccggccaggtcgaggcgctg
cgcagcaagaacggcgccacctccgacgagatcgacaggctcaccgtgtcgctcgaagag
gccgccgagcgggcggagatcgccgtcgaggagctcgaagaggccaaggccgcgggtggc
gtcgaggaatccgacgactccgacctgcaggcccaccacgaccgcgcggtcgaggccaac
aacgccgccaaggcgcgggtcgaggaactggtcaaggccgagcgtgccgccgaacgcgag
atcgcgtcggagaaggcccgcgtcgaggcgctgtcgatggggctgcgccgcaaggacggc
gccggcgcgctgctcggtgcgcagcacgaactgccgggtctgctcggttcggtcgccgcg
ctgctcaccgtcgaagcgggccacgaggtcgcgctggccgcggcgctcggcccggtcgcc
gacgcggtcgcggtcaacggcggcgaagacgcgctcgccgcgctgaagttcttgaaggac
aacgactccgggcgcgcgggcattctgctcggcggtctggaatccactgtggacaccagt
gcctggccgtcgctgcccgagggcgcgcgctgggcgcgcgaagtcgtcacggcgccgccc
gcgttgcggtccgccgtcgagcacgcgctcgaccgggtggccattgtggacggtctggag
tccgcgcggcggctcgtcgaggtgtatcccgaagtcagcacggtcacgcccgaaggcgat
gtcttcggcgcgcgctgggcggtcggcgggtccgcccgcagtgagagcgtcatcgaggtg
caggccgcggtcgacgaggcgagcgatcggctgagcgccgccgagcgcgcgctggaacgc
accgccgcggaactcgaaggtgcccgcgccgggcaggccgcccggcgcgaagaggtcggc
agggccaaggaagcgctgggagacgcgaaggtccgcaaggctcgctcgtccgagcgtctg
aaccggatgcagcaggccgcgcgcgccgcgcaggccgaaatggaccggctgagcaaccag
cgcgccaaggtcgagcagagccgcgaagaagcgttgcggcagctagccgaactcgaagag
cgcctggccgccgtcgccgaccaggaggtcgacgaggatccggacaccgccgagcgtgac
caggccgccgaagacctcggcacggtccgccaggaggagatggagtcccggctcgcgctg
cgcaccgccgaggagcgcgcgcggagcatccagggcaaggccgaatcgctccgccgggcc
gcgcacgccgagcggcaggcgcgcgaacgcgccgaaaagtccagggccgcgcggaaacgc
ggcgccgagatcgccaacgcggtggtcaacggcggcgagatcgcgctggagcgcatcgag
gtctccgtgcagcgcgccgcccacgaacgggacgaggcgcaggcgcagcggcagtcgcgg
gagaccgcgctgacccaggtccgcagcaaggtccgcgagctgaccggcgaactggagaag
ctcaccgacgccgtccaccgtgacgaggtgctgcgtgccgagcagcggctgcggttggag
caactcgaaaccaagatcgccgaggacttcggcatcggtctcgaggacctcgtgtccgag
tacggcccggatgtccccgtgccgccgagcgcgggggagatggccgagtacgaggccgcc
aaggaacgcggcgaggacgtcaccccgccgccgccgatgccgttcgaccgcgacacccag
gcacgccgggcgaagcgcgcggagaaggacctgagcctgctgggcaaggtcaacccgctg
gcgctggaggagttcgcggcgctggaggagcggtacaagttcctctcgacccagctcgaa
gacctcaaggacacccgcaaggacctcgaagccgtcatcaagcaggtcgacgagaagatc
ctcgaggtcttcgcgtccgcctacgaggacgtcgcgcgcgagttcgagacggtgttcagc
gtgctgttcccgggcggtgaggggcgcatggtgctcactcagcccaacgatctgctttcc
accggtgtcgacgtcgaagcgcgcccgccgggcaagaaggtcaagcggctctcgctgctc
tccggtggcgagaagtcgctcgtcgccgtcggcatgctggtggcgatcttccgtgcccgg
ccttcgcccttctacgtcatggacgaggtcgaggccgcgctcgacgacaccaacatgcga
cggctgatcgggctgctggagcagctgcgggactcttcgcagctgatcatcatcacccac
cagaagccgaccatggagatcgccgacgccctgtacggcgtttcgatgcagggtgacggc
atcacgaaggtgatctcgcagcggctgcgtacgtccgaagaggaactcgtcacctcgtga
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