Amycolatopsis sp. TNS106: CVV72_39770
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Entry
CVV72_39770 CDS
T10876
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
amys Amycolatopsis sp. TNS106
Pathway
amys02020
Two-component system
amys02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CVV72_39770
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CVV72_39770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amys03021
]
CVV72_39770
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
amys02035
]
CVV72_39770
Transcription machinery [BR:
amys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVV72_39770
Bacterial motility proteins [BR:
amys02035
]
Flagellar system
Flagellar assembly proteins
Stator
CVV72_39770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
KORA
Motif
Other DBs
NCBI-ProteinID:
QXV62532
LinkDB
All DBs
Position
8576361..8577209
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AA seq
282 aa
AA seq
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MTADPHVTEAAGKHRPGGDGPAVTPEARTGYEVDAGIQALWREFTESPDQVVRDRLVLHY
APLVKYVAGRVGTGLPTHVDVGDLIQSGIFGLVDAIEKFEPARGLRFETYAMQRIRGAIL
DDLRSQDWVPRAVRSKAREAERALERLGARLNRTPTDAELAAELEISVDDLREFYGQMQL
TSVIALEDLVAAGKDSGSLVDTLPDDGAVDPVAVLVDQDNRRQLAQAIAQLTERDRIVVG
LYYFESLTLAEIGKVLGVTESRVSQLHTRAVMRLRAKLVEQA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgacccacatgtcaccgaagccgccgggaaacaccgccccggcggggacggt
cctgccgtcacgcccgaagcgcggaccggctacgaggtggacgccgggatccaggcgctg
tggcgtgagttcaccgagtctccggaccaggtcgtgcgcgaccggctcgtgctgcactac
gccccgctcgtcaaatacgtcgccggccgggtcggcaccgggctgccgacccatgtcgac
gtcggcgacctgatccagtccggaatcttcggcctggtcgacgcgatcgaaaagttcgaa
cccgccagggggctgcggttcgagacctacgccatgcagcgcatccggggcgcgatcctc
gacgacctccgctcccaggactgggtccccagagcggtgcgcagcaaggcccgtgaggcc
gaacgtgccctggaacgcctcggcgcccggctgaaccgcaccccgaccgacgccgaactc
gcggccgagctcgaaatcagcgtcgacgaccttcgcgagttctacggccagatgcagctg
accagcgtcatcgccttggaagacctggtcgccgcgggcaaggacagcggctcgctggtc
gacacccttcccgacgacggcgccgtcgacccggtggccgtcctggtcgaccaggacaac
cgccgtcagctcgcgcaggcgatcgcccagctcaccgaacgcgaccgaatcgtggtcggg
ctctactacttcgaaagcctgacgctcgccgagatcggcaaggtcctcggcgtcaccgag
tcgcgggtcagccagttgcacacccgcgccgtcatgcggttgcgcgccaaactggtcgag
caggcctag
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