Amycolatopsis sp. TNS106: CVV72_39835
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Entry
CVV72_39835 CDS
T10876
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
amys Amycolatopsis sp. TNS106
Brite
KEGG Orthology (KO) [BR:
amys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amys03009
]
CVV72_39835
Ribosome biogenesis [BR:
amys03009
]
Prokaryotic type
ribosomal protein modification factors
CVV72_39835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
DUF5633
Motif
Other DBs
NCBI-ProteinID:
QXV62544
LinkDB
All DBs
Position
complement(8588490..8590658)
Genome browser
AA seq
722 aa
AA seq
DB search
MGSEEVRPRLDGIEITDLEPELCFLVTPNGGQFYIAAPTREFRAWASRCDGTRTRAELLA
GMPPDYEEMMEILEADGCLRPGPDAGTEDIASTSILLTGSPVLIEPLAEILGGSGYASVE
TVPYFHDLSERDIGNTVVVAAFDHPAYTESIALDALCAGSGVRWLPLRRERGRVIAGPAI
APGGIDFADVVARRRSAAQDPRVVEAFLSASSDSTPLRPGDARWALTTFAVHLERWLSGG
RSGMTTGEIELNPADLTEIRRPILPVPDRARPVPDATDPELLVDDQTGIVTGVGEIPPAP
GMPARLRVCAVDVADMRRVTNWPNDRQAFGTSWHDFDLARQSAIGEAVERYCGSWLAPER
EVCFGSYKQFDRYGVPALDPQRLNLYSATQYRSRGFPFAPLTQDTECSWVEGFSHTTGEP
VWVPAFLFSNERRPGEASFADPLIAGLASGTTEEHAVTSGLEEVLERDTTMLWWANTPRL
GRLTIPDEIRSLIADATDDYDVTLIHLDNEFDVPVVAAVVLDRVKRWLSIGFATRPDALE
AAKKALAEGFTLQHTCRALDDERELSGMRRDLPHLGNLKPHRADRRYLDSYREDFADVVD
LLCQQQIYLDPRAVKRVAPWVMDLPARGWDDLPALGERRLKAYQARVEARGFEVISVDLT
TCDVAAAGFRAAHTLVPGLVSNFPAGSPLWGNGRIAGAAVTLGWRDEPLAEHELNVFPLP
HA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgaagaggtcagaccgcggctcgacggaatcgagatcaccgatctcgaaccg
gagctctgctttctcgtcacgcccaacggcgggcagttctacatcgccgcgcccacccgg
gagttccgcgcttgggcgagccgctgcgacggcacccggactcgcgccgaactcctggcc
ggcatgcctccggactacgaggaaatgatggagatcctcgaagcggacggctgcctccgc
cccggcccggacgccgggacggaagacatcgcctcgacctcgatcctcctcaccggctcg
cccgtgctcatcgagcccttggcggaaatcctcggcggcagcggatatgcgagcgtcgag
acggttccctacttccacgatctgtccgaacgggacatcgggaacacggtcgtggtcgcg
gccttcgatcatcccgcctacaccgaatcgatcgccttggacgcgttgtgcgccggcagc
ggagtgcgctggctgccgttgcgccgggaacgcggccgcgtgatcgccggaccggccatc
gcccccggcggcatcgatttcgccgacgtcgtcgcgcggcgccgctccgccgcacaggac
ccgcgtgtcgtcgaggcgttcctttcggcctcctcggactccaccccgcttcggcccggc
gacgcacgctgggccctgaccaccttcgccgtccatctcgaacgctggctctccggcggg
cgatccggtatgaccaccggcgagatcgaactgaatccggccgacctcaccgagatccgc
cgcccgatcctccccgtacccgaccgggcccgccccgttcccgacgcgaccgaccccgaa
ctgctggtggacgaccagaccgggatcgtgaccggtgtcggcgagatcccgcccgccccg
ggaatgcccgcccggctgcgggtctgcgcggtcgatgtcgcggacatgcgccgcgtgacg
aactggcccaacgaccgtcaggcgttcggcacgtcgtggcacgacttcgacctcgcgcgc
caatcggccatcggcgaagcggtggagcgctactgcggaagctggctcgctccggagcgc
gaagtgtgcttcggcagctacaagcaattcgaccgctacggagtccctgcactcgatccg
cagcggctgaatctctactcggccacgcagtaccggtcccggggtttcccgttcgcacca
ctgacccaggacacggaatgctcgtgggtggaaggcttctcccacaccaccggcgaaccc
gtctgggttccggcgttcctgttctcgaacgaacgccgaccgggggaagcgtctttcgcc
gatccgctgatcgccggcctcgccagcgggaccaccgaagaacacgccgtcacctccggc
ctcgaagaggtcctcgagcgcgacacgaccatgctctggtgggcgaacacgccacgcctc
ggcaggctcacgatcccggacgagatccggtcgctcatcgccgacgccaccgacgactac
gacgtcacgctcatccatttggacaacgagttcgacgtcccggtggtcgccgcggtggta
ctcgaccgcgtgaaacgctggctgtcgatcggcttcgcgacccggccggacgcgttggag
gccgcgaagaaggctctcgccgaagggttcacgctccagcacacctgccgtgccctcgac
gacgagcgcgagctgtccggcatgcgccgggacctgccgcatctgggcaacctcaaaccg
caccgggccgaccggcgctacctggactcgtaccgcgaagacttcgccgacgtcgtggat
ctcctttgccagcaacagatctacctcgatccgcgcgccgtgaagcgagtggctccctgg
gtcatggacctgccggcccgcggctgggacgaccttcccgccctcggggaacggcggctc
aaggcctaccaagcccgggtcgaagcccgggggttcgaggtgatcagcgtcgacctgacg
acctgcgacgtcgcggccgccggattccgcgccgcgcatacgctggtcccggggctcgtc
tcgaacttccccgccggatcaccgttgtggggcaacggaaggatcgccggcgcggcggtg
accctcggctggcgggacgaaccgctcgccgagcacgaactcaacgtcttcccgctcccc
cacgcgtga
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