Amycolatopsis sp. TNS106: CVV72_40960
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Entry
CVV72_40960 CDS
T10876
Name
(GenBank) conjugal transfer protein TraA
Organism
amys Amycolatopsis sp. TNS106
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
MeaB
TraI_hel_assoc_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QXV63534
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Position
pAS20800:24617..29464
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AA seq
1615 aa
AA seq
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MTMTCHVLHAGDGYTYLTDQVASFDMEREPGQSLADYYLASGTPPGLWAGSGIADLGMSG
QVTEEHMRALFGEGLHPDADAMVARWIDAGMPYAKAIDRARLGRRFAPPKGDKSPLGVAV
QEGYDRFAVLHDRRPSVVERREIKEKIAAEMLAGPGGTPPEPAVVRRFLVDELGKADQPV
TGFDLVFTPPKSASVLWGLGKPDVAQAIEEVHEQAWRTALAYGEREAAFTRIGAGGVGQI
DTNGFVAVAFQHRDSRCGDPNLHTHVVVSNRVLGADGKWRTIDSRQLFRVAVSMSETYNA
AVEHGLTERLGVAWHNVPKPDGKRPVREIAGVPDELITGFSSRRNQVETNYERLIGEYVR
AYGHTPSRSVQMRLAQQATLEDRPEKATAGTTLGEQRDAWRAAAEGMLPGRNLDLVLAAT
MGRAAAAAEPVEVGQVAATVVDVVSRHRSTWSVYHVRSEAIRQLKPHRFASAADRERVTE
EVVATALGTESIELSVALTPPPPTLLQRADGESIYQRHGATRYTSTEILDAEQRLLDAAR
TTAGPVVAARDVHAAIAAHEARTGRALDPGQRQLVEQFVTCGKALAVGIGPPGAGKSTAM
RAVRTAWQTTGGRIIGLAPSAAAAQVLGAELGVQADTMHRLVTLHAHGREIDLRAGDMVL
VDEAGMGGTRTLDAVRAIAAERGAVVRLVGDYRQLAAVEAGGALRLIHHDHGGTELTRLH
RFRDPAEATAVLQLRVGDKAAVGFYSGRGRLHGGTRTAVLDQLYADWNTDTTLGRASIMM
SDSTDVVRELSGRAQTDRRGTGEVEPGGVRLRDGMTAGVGDRIVTRDNQRRLALGPTDYV
KNGDLWDVTARHDDGSLTVRHLRHRGEITLPAPYVATQVELGYAATVHRSQGLTVDVSRG
YLTPIAVREAALVALSRGTEENHAYLDTDTILDHGEPGTLPGELFYRHRNTDPAAAAMTA
ILRREGAELSATEHLRNALEEPFRLDVAVPIYLHALDVHRGPDAFVDAETWVHQALPAYA
DEILLDPAWPALADVLHQVRDTGADPVDVLARRAAQRPFDDPADPAHSIAQVLHHRLEPD
LPAPADGADAAGERPVLLPGWIPEPPPVDPAAPRELADLQEWLAEKARELADRVRRLGEQ
AAEAGPAWAAHLGPVPLDALDRDTWIHRAGQVAAYRERFGVPDDDPELLPHTTADTARAW
VARHLAATEHTPLVDDPVDVDGHLLAATEQTDPGQNEEPVEAMWERMDSWRAEHETSYPT
EHTDVAEPAMTRGAELALRLRHTHLQIELTGARIAGDTERVQELLAQREEFDAAHPELVA
RIRAEHEQRQQQEREWEAAWSERPHSVLSGDEIAAAIAREQRRIEKATQARQILTRRLAD
LEPQVAAGAGPRVRDLDARVTALTARADLATQYDGLAREHQKAATEARVATANADDRARK
ADQLTRWDALRHPGLRGRLTEEAADLREAATQADAVASDLRARMNALSQRDDDPGSLHRA
RAEARLAVDNHDRDRQTAQAADQRDVDDLHRQTDRASHIVDNAGTTLGELRDEADLRTRM
PENQHAAEDNYRSTERGLQAERALAAAQRRAARQDERYDPHRYGQDRGHGMGMGR
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacgtgtcacgtcctgcacgcgggggacggctacacgtacctgaccgaccag
gtcgcttcgttcgacatggagcgcgagcctgggcagtcgctggcggactactacctggcc
tcgggcaccccgccgggcctgtgggccgggtcggggatcgcggacctgggcatgtccggc
caggtcaccgaggagcacatgcgtgccctgttcggcgagggccttcacccggacgcggac
gcgatggtcgcccgctggatcgacgccgggatgccgtacgcgaaggcgatcgaccgggcc
cggctgggccggcggttcgcgccgccgaaaggcgacaagagcccgctcggggtcgccgtg
caggaaggctacgaccggttcgcggtcctccatgaccgccgtccgagcgtggtcgagcgc
cgggagatcaaggagaagatcgccgcggagatgctggccgggccgggcggtacgccgccg
gaaccggcggtggtgcggcgcttcctcgtcgacgagctcggcaaggccgatcagcccgtc
accggtttcgatctcgtcttcaccccgccgaaatccgcgtcggtgttatggggcctgggg
aaaccggacgtcgcgcaggccatcgaggaagttcacgagcaggcgtggaggacggcgctc
gcctacggcgaacgcgaggccgcgttcacccgcatcggcgctggcggggtcgggcagatc
gacacgaacggcttcgtcgcggtcgcgttccagcaccgcgattcccgctgcggcgacccg
aacctccacacccacgttgtggtctcgaaccgcgtgctcggcgccgacgggaaatggcgg
acgatcgattcgcggcagctgttccgggtcgcggtgtcgatgtcggagacctacaacgcc
gctgtggagcacggcctgaccgagcggctgggcgtcgcctggcataacgtgccgaagccc
gacgggaagcggccggtgcgggagatcgccggtgtcccggacgagctgatcaccgggttc
tccagccgtcgcaaccaggtcgagaccaactacgagcgcctcatcggcgagtacgtgcgg
gcctacgggcacacgccgtcgcgcagcgtgcagatgcgcctcgcgcagcaggccacgctg
gaggaccggccggagaaggccaccgccggaacgaccctgggcgagcagcgcgatgcctgg
cgggcggcggccgaaggcatgctgcccggccggaacctcgacctggtgctcgccgcgacg
atgggccgcgcggccgcggccgccgagccggtcgaggtcgggcaggtggcggcgacggtg
gtcgacgtcgtctcgcggcaccggtcgacctggtcggtgtatcacgtgcggtccgaggcg
atccgccagctcaaaccccatcgtttcgcctcggccgccgaccgcgagcgggtcaccgaa
gaggtcgtcgccacggcgctgggcaccgaatccatcgagctgtcggtcgccctcaccccg
ccgccgccgacgctgctgcagcgcgccgacggcgagtcgatctaccagcggcacggcgcg
acccgctacaccagcaccgagatcctcgacgccgaacagcgcctcctcgacgcggcccgc
accacggccggcccggtcgtcgcggcccgggacgtgcacgcggcgatcgcggcgcacgag
gccaggaccgggcgggcgctggatcccgggcagcggcagctggtggaacagttcgtcacc
tgcggaaaagcgctggcggtcgggatcggcccgccgggggcggggaagtcgacggcgatg
cgcgcggtccgcacggcctggcagaccaccggcggccggatcatcggcctcgctccctcg
gccgccgcggcccaggtcctcggcgccgagctcggcgtccaggccgacaccatgcaccgg
ctggtcaccctgcacgctcacggccgcgagatcgacctgcgcgccggggacatggtgctg
gtcgacgaggccgggatgggcggcacccgcaccctcgacgccgtgcgcgcgatcgccgcc
gaacgcggagccgtcgtccgcctggtcggcgactaccgccagctcgccgccgtcgaggcc
ggcggcgccctgcggctgatccaccacgaccacggcggcaccgaactgacccgcctgcac
cgcttccgcgacccggccgaagccaccgcggtgctgcaactgcgcgtcggcgacaaggcg
gcggtcggcttctacagcggccgcggccgcctgcacggcggcacccggaccgccgtgctg
gaccagctctacgccgactggaacaccgacaccaccctcgggcgggcgtcgatcatgatg
tcggactcgaccgacgtcgtccgcgaactgtccgggcgggcgcagaccgatcgccgcggc
acaggcgaggtcgaacccggcggggtgcggctgcgcgacgggatgaccgccggggtcggg
gaccggatcgtcacccgtgacaaccagcgccgccttgccctcgggcccaccgactacgtg
aagaacggcgacctgtgggacgtcaccgcccgccacgacgacggctccctcaccgtccgg
cacctccgccaccgcggcgagatcaccctccccgccccgtatgtcgccacccaggtggag
ctcggctacgccgccacggtgcaccgctcccaaggcctcaccgtcgacgtctcccgcggc
tacctgaccccgatcgccgtccgcgaagccgcgctcgtcgccctctcccgcggcaccgag
gagaaccacgcctacctcgacaccgacaccatcctcgaccacggcgaacccggaaccctg
ccaggcgaactgttctaccggcaccgcaacaccgacccggccgccgcggcgatgactgcc
atcctgcgccgcgaaggcgccgaactctcggccaccgaacacctgcggaacgcgctggag
gaaccgttccggctcgacgtcgccgtccccatctacctgcacgctctcgacgtccaccgc
ggacccgacgcgttcgtcgacgccgaaacctgggtgcaccaggcgctgccggcgtacgcc
gacgagatcctgctcgacccggcctggcccgcgctcgccgacgtcctgcaccaggtgcgt
gacaccggcgccgaccccgtcgacgtcctcgcccgccgcgccgcccagcgtccgttcgac
gacccggccgacccggcccactcgatcgcgcaggtcctgcaccaccgcctcgaacccgac
ctccccgccccggcggacggcgccgatgcggcgggggagcgaccggtgctgctgcccggc
tggatccccgagcccccaccggtcgacccggccgcgccccgcgagctcgccgacctgcag
gagtggctggccgagaaggcccgcgagctcgccgaccgtgttcgccgcctcggcgaacag
gccgccgaggcgggcccggcctgggccgcgcacctcggacccgtcccgctcgacgccctc
gaccgcgacacctggatccaccgcgctgggcaggtcgccgcctaccgcgaacgcttcggc
gtccccgacgacgaccccgaactgctcccgcacaccaccgccgacaccgcacgcgcctgg
gtcgcccgccacctcgccgccaccgagcacaccccgctcgtcgacgaccccgtcgacgtc
gacggtcacctcctggccgccaccgaacagaccgatcccggccagaacgaggaaccggtc
gaggccatgtgggagcggatggacagctggcgcgccgaacacgagaccagctaccccacc
gagcacaccgacgtcgccgaacccgccatgacccgcggagccgagctggccctgcggctc
cgccacacccacctgcagatcgaactgaccggcgcccgcatcgccggagacaccgagcgg
gtgcaggaattgctggcgcagcgggaagagttcgacgccgcccatcccgagctcgtcgca
cggatccgcgccgagcacgagcagcggcagcagcaagagcgggagtgggaagccgcctgg
agcgagcgaccgcacagcgtcctctccggtgacgagatcgccgcggcgatcgcccgcgaa
caacgccgcatcgagaaggccacccaggcccgccagatcctcacccgccgtctcgccgac
ctcgaaccccaggtcgccgccggcgccgggccgcgggtgcgggacctcgacgcccgcgtc
accgccctgaccgcccgcgccgacctggccacccagtacgacggcctcgcccgcgaacac
cagaaagccgcgaccgaagcccgcgtcgcgaccgcgaacgccgacgaccgcgcgcggaaa
gccgaccagctcacccgctgggacgcgctccgtcaccccggcctgcgcggccggctgacc
gaggaagccgcagacctgcgcgaagccgccacccaggccgacgccgtcgcctctgatctc
cgcgcccgcatgaacgccctcagccagcgcgacgacgaccccggcagccttcaccgcgcc
cgcgccgaagcccgtctcgccgtcgacaaccacgaccgggaccgtcagaccgcccaggcc
gccgaccagcgcgacgtcgacgacctccaccgccaaaccgaccgggccagccacatcgtc
gacaacgccggcaccaccctcggcgaactccgcgacgaagccgacctccgcacccgcatg
cccgagaaccagcacgccgccgaagacaactaccgcagcaccgaacgcggcctgcaggcc
gaacgcgcgcttgcggccgcgcaacgacgcgccgcacgccaggacgagcgctacgacccg
caccgctacggccaagaccgcggccacggcatgggcatgggccggtag
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