Malaciobacter mytili: AMYT_0950
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Entry
AMYT_0950 CDS
T05895
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
amyt
Malaciobacter mytili
Brite
KEGG Orthology (KO) [BR:
amyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyt03016
]
AMYT_0950 (truD)
Enzymes [BR:
amyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AMYT_0950 (truD)
Transfer RNA biogenesis [BR:
amyt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMYT_0950 (truD)
Prokaryotic type
AMYT_0950 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AXH14539
UniProt:
A0AAX2AK38
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All DBs
Position
933262..934326
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AA seq
354 aa
AA seq
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MTNLQRYLNHSKIDVVFKQSKEDFVVTEIPLYDFSNEGEHLIIKFRKKDLTTWDALSIFA
NHFGCKSRDIGYAGLKDKNAMTVQHISVHRKFEEKLATFSHDQIKILDTTYHNNKIKIGH
LKGNKFFIRLKRVNLVDAKKIEQVLGQIATLGMPNYFGFQRFGIEQNNYEKGEAIINGTL
KEKDRKLKQMYINAYQSYLFNNWLSKRIEISKLIDAFEPKEIYEKISLPLDLVKSMKKQA
HPFKILTGDLMSHYPYGKIFHAQELEAEAEKFYNRDRVPTGLLCGKRVKKSIDEALTFEE
EFTKNIPEDGARRFAWIFPEEVESNYKEDKNWMELQFYLPKGSYATELISELIH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaatttacaaagatatttaaatcattcaaagattgatgttgttttcaagcaaagc
aaagaggattttgttgttacagaaatacctttatatgattttagcaatgagggtgaacat
ttaattattaagtttagaaaaaaagatttaacaacttgggatgctctttcaatttttgca
aatcattttggttgtaaaagtagagatattggatatgcaggattaaaagataaaaatgca
atgacagttcaacatatctctgtgcatagaaaatttgaagaaaaacttgctactttttcc
catgaccaaataaaaattctagatactacatatcataataataagataaaaattgggcat
ttaaaaggcaataaattttttattagattaaaaagagtaaatcttgtagatgcaaaaaaa
atagaacaagttttaggacaaattgccactttaggtatgccaaattattttggttttcaa
agatttggaattgagcaaaataattatgaaaaaggtgaagcgattataaatgggacttta
aaagaaaaagatagaaaattaaagcaaatgtatatcaacgcttatcaaagttatttgttt
aataattggctttcaaaaagaatagaaatctctaagcttattgatgcttttgagccaaaa
gagatatatgaaaaaatatctttacctttagatttagtaaaaagtatgaaaaaacaagcc
catccttttaagatattaacaggggatttaatgtctcattatccttatggaaagattttt
catgcccaagagttagaagctgaagctgaaaaattttacaatagagatagggtacctaca
ggattactttgtggaaaaagagtaaaaaaatcaatagatgaagcattaacttttgaagaa
gagtttactaaaaatatcccagaagatggtgctagaagatttgcttggatttttcctgaa
gaagttgaaagtaactataaagaagataaaaattggatggaacttcaattttatttacca
aaaggttcttacgctacagagttaatttcagaattaattcattaa
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