Malaciobacter mytili: AMYT_1609
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Entry
AMYT_1609 CDS
T05895
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease SbcCD, ATPase subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amyt
Malaciobacter mytili
Brite
KEGG Orthology (KO) [BR:
amyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyt03400
]
AMYT_1609 (sbcC)
DNA repair and recombination proteins [BR:
amyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMYT_1609 (sbcC)
Archaeal homologous recombinant proteins
AMYT_1609 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ATG16
ABC_tran
SMC_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXH15184
UniProt:
A0AAX2AF78
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All DBs
Position
complement(1590383..1593964)
Genome browser
AA seq
1193 aa
AA seq
DB search
MKILKIKSLNINSLKGEFEVDLEKFLKDESLFAITGPTGAGKSTILDVITCALYGRTARL
SNPNELMSRHTGECLCEVEFEVKGKVYRSSWSQKRARKNADGAFQSAKMEISEVESGKVL
ESYLSKVPKYIEDLSGLDFDRFIQSMMLAQGSFDAFLKAKENERSSLLEKITGTQIYKQI
SQEIYQTYTSKNDEIKLDENLLGNIELLSNEVVVEKTLVLNNSKAQKLELDTKVNDLKKV
INWLENLQKLETDNNRYIQEFEQITLEKENKKEDFVRLDLANKALNIQPIYQEKNSLTQI
INQDKEKLEKLQKELIELKQQLESKTNESLKVKDELDKEKISFDTNSKKLQEVRTLQTKI
ESKLQNIKELENKISSQNEQKTKLNEDLKVLKTNQERIENDLKTINDYLIKNKNDESLKE
EISLISKNVNDYKDVLKLLKQIEEKLQNNSLNEKILQDSFSKAKKEFDEIKILFDLKDKE
YKELEIQTSSFNQKEANNRDRLKSIEKLITSIDEYKRLLEFILKEENIISSSKDESKIIK
TNIEEKTKLINEIQTHIQTLNDKREAELLIAKYESDRVNLKEGEECFLCGSKEHPFVNHR
KSVNADETSSIIAQKKQIFDEENKALRTFELNLSKLETKVESSTLELNKLSKNKEEIEQV
FSSLNFILMDDSKTNLEEEKQLLEKELRNIVKIRDEKEKVLAQRDNLQKELNTKQTLVLQ
NEQELYKLKSLIEQLQNEQIQNTSKKQSLEEELSKVYTKYELIFDEKFEENFRAIVVKKD
SFIKNETSKKELDTKLQGLSVQRKELDTKIISIELSLKTEAEQLSKISNETKELQIQSKA
ILDVSDLNIFEKEITSKFNIIYEKYNSLSKELVTLNSRNESLNSQIIELNQRLIDNSTKL
EETKQNFNKALVENSFTSKEEFEKALLSKEQKDVLSLMCKALEEKYTQIQTLKTDTSKKL
SEQKELNLTDKELQTLNDKLKELQTATDELQKSIGSLEKELEINASNMKKHEDKIKELEK
KKEAFKVWIKLNEMIGSASGDKFAKFAQGITLEQLIYLANKHLQILSPRYELQRSSDSSK
LLEIEIIDGFQGDVVRGVNTLSGGESFIVSLSLALGLSSLASQKISIDSLFLDEGFGTLD
SDSLELALNALNQLQSSGKMVGVISHVEALKERIPLQVKVEPKGDGTSVLELS
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactaaaaataaaatcactaaatattaactctctaaaaggtgagtttgaagta
gacttggaaaagtttttaaaagatgaatctttatttgctattactggaccaactggtgct
ggaaaaagtactattttagatgtaattacatgtgctttatatggaagaactgcaagatta
tctaacccaaatgaacttatgagtagacatactggtgagtgtttatgtgaagttgaattt
gaagtaaaaggtaaagtttatagaagttcttggagccaaaaaagagctagaaaaaatgct
gatggagcttttcaaagtgctaaaatggaaattagtgaagttgaatcaggaaaagtctta
gaatcgtatctttctaaagttccaaaatatatagaagatttatctggacttgattttgat
agatttattcaatctatgatgttggctcaaggaagttttgatgcctttttaaaagcaaaa
gaaaatgagcgttcaagtttacttgaaaagattactggaacacaaatctataaacaaata
tctcaagaaatatatcaaacttatactagtaaaaatgatgaaattaaattagatgaaaat
ttattaggaaatattgaattattatcaaatgaagttgttgttgaaaaaacactagtttta
aataattcaaaagcccaaaaacttgaacttgatactaaagtaaatgatctaaaaaaagta
attaattggcttgaaaatttacaaaagttagaaactgataataatagatatattcaagaa
tttgagcaaattactcttgaaaaagagaataaaaaagaagactttgttagattggattta
gcaaataaagctttaaatattcagccaatatatcaagaaaaaaactctttaactcaaata
ataaatcaagataaagaaaaactagaaaaacttcaaaaagaactaattgaattaaaacag
caactagagtcaaaaactaatgaatcattaaaagtaaaagatgaattagataaagagaaa
atttcatttgatacgaactctaaaaaacttcaagaagtaagaacactacaaactaaaatt
gaatcaaaacttcaaaacatcaaagagttagaaaataaaataagctctcaaaatgaacaa
aaaacaaaactaaatgaagatttgaaagtattaaaaacaaatcaagaaagaattgaaaat
gatttaaaaactataaatgattatctaataaaaaataaaaatgatgaatcattaaaagaa
gagatatctttaatctctaaaaatgtaaatgattataaagatgtactaaaacttttaaaa
caaatagaagaaaaacttcaaaataatagtttaaatgaaaagattttacaagatagtttt
agcaaggcaaaaaaagagtttgatgaaataaagatactgtttgatttaaaagataaagag
tataaagagttagaaattcaaacttcaagttttaatcaaaaagaagcaaataatagagat
agattaaaaagtattgaaaaactaattacttctatagatgaatataaaagattgttggaa
tttattttaaaagaagaaaacatcatatcttcttcaaaagatgaatcaaaaattataaaa
acaaatatagaagaaaaaacaaaactaataaatgaaattcaaacacatatacaaactcta
aatgataaaagagaagcagaacttttaatagcaaaatatgagagtgatagagtaaatcta
aaagagggtgaagagtgttttttatgtggttcaaaagagcatccgtttgtaaatcataga
aaaagtgtaaatgctgatgaaacaagttcaataatcgctcaaaagaaacagatatttgat
gaagaaaataaagctttacgaacttttgaattaaatttatcaaaacttgaaactaaagta
gagagttctactttagaactaaacaaattatcaaaaaataaagaagagatagaacaagta
tttagttcattgaattttattttaatggatgattctaaaacaaacctagaagaagaaaaa
caacttttagaaaaagagttaagaaatatagtaaaaattagagatgaaaaagaaaaagtt
ttagctcaaagagataatcttcaaaaagagttaaatactaaacaaactttagttttacaa
aatgaacaagaactttataaactaaaaagtttaatagaacaattacaaaatgaacaaatt
caaaacacatctaaaaaacaaagtttagaagaggaactttcaaaagtttatactaaatat
gaactaatatttgatgaaaaatttgaagaaaactttagagcaatagtcgtaaaaaaagat
agttttattaaaaatgaaacatcgaaaaaagagcttgatactaaacttcaaggcttaagt
gtacaacgaaaagagcttgataccaaaatcatatcaatagagttaagtttgaaaacagaa
gctgaacaactctctaaaatctctaatgaaacaaaagagttacaaattcaaagtaaagct
attttagatgtatctgatttaaatatctttgaaaaagagataacaagtaaatttaacatt
atctatgaaaaatataactctttatcaaaagagttagtaactctaaattcaagaaatgag
tcactaaattctcaaataatagagttaaatcaaagacttatagataatagtacaaaatta
gaagagacaaaacaaaatttcaataaagctcttgtagaaaatagttttacttcaaaagaa
gagtttgaaaaagcacttttaagtaaagagcaaaaagatgtgttatctttgatgtgtaaa
gcactagaagaaaaatatactcaaatccaaactcttaaaacagatacatcaaaaaaacta
tctgaacaaaaagagttaaacctaacagacaaagaacttcaaactttaaatgataaatta
aaagagttacaaacagctacggatgaacttcaaaaatcaataggaagcttagaaaaagag
cttgaaatcaatgcttcaaatatgaaaaaacatgaagataaaattaaagagttagaaaag
aaaaaagaagcctttaaagtatggataaaattaaatgaaatgataggttcagcaagtgga
gataaatttgccaaatttgcccaaggtatcactttagagcaactaatctatctagcaaat
aaacatttacaaatattaagtccaagatatgaacttcaaagaagtagtgattcaagtaag
ctacttgaaattgagataatagatggtttccaaggagatgtggtaagaggtgtaaataca
ctctcaggaggagaaagctttatagtaagtctatctttagctttaggtctttcaagtcta
gcaagtcaaaagataagtatagattcactttttttagatgaggggtttggaacactagac
agtgatagtttggagttagcactaaatgcactaaatcaacttcaaagttcaggaaaaatg
gtaggtgtgatttcccatgtggaagcactaaaagagagaattccattgcaggtaaaggtt
gagcctaagggtgatgggacgagtgtgttggaattaagttag
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