Malaciobacter mytili: AMYT_1610
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Entry
AMYT_1610 CDS
T05895
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease SbcCD, nuclease subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amyt
Malaciobacter mytili
Brite
KEGG Orthology (KO) [BR:
amyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyt03400
]
AMYT_1610 (sbcD)
DNA repair and recombination proteins [BR:
amyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMYT_1610 (sbcD)
Archaeal homologous recombinant proteins
AMYT_1610 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AXH15185
UniProt:
A0AAX2AH60
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All DBs
Position
complement(1593961..1595154)
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AA seq
397 aa
AA seq
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MRLLHTSDWHLGQNFMGKSRAEEHEDFLSWLLEIIKEKHVEVLVISGDIFDTGTPPNYAL
ELYYNFLKELSSIKTLITTIITAGNHDSISTLKAPKQLLEVLNVHVITTGDEDENVIIPI
NKNDDLISIVCAVPFLRDSVIRESLSGITISEKEKLANSGIKAYYENCYSKALELKKDKN
IPIIAMGHLTTVGSRSSQSERDIYIGGTIDIGGDYLASMFDYVALGHLHINQVVGNNEHV
RYSGSPIPLSFSESKNTQKVNLVSFTQNEISIEEIEVPLSRKLVIIKGNYEHIKNELTKI
EDKNSWIEVHISDDNAMYANNEIRQLASKLELILLAVKIDKSEKQLKANELKVISLDELS
VEQVFEKRLELENLEDKEFEKELFLNFKEVVSKVQSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttattacatacatcagattggcatcttggtcaaaattttatggggaaaagtaga
gctgaagaacatgaagattttctttcttggcttttagaaattataaaagaaaaacacgtt
gaagttttagttatatcaggagatatttttgatactggaacgcctccaaattatgcttta
gagctttattataattttttaaaagaactatcaagtataaaaacattaattactactatt
ataactgctggaaatcatgactcaatatcaactttaaaagcacccaaacaacttttggaa
gttttaaatgttcatgtaattacaactggtgatgaagatgaaaatgtaattattcctata
aataaaaatgatgatttaatatctattgtttgtgctgttccatttttaagagatagtgtt
attagagaatctttaagtggaataacaattagtgaaaaagaaaaattagcaaatagtggt
attaaagcttattatgaaaattgctactcaaaagcacttgaactaaaaaaagataaaaat
ataccaataattgctatgggacacttaacaacagttggaagtagaagtagtcaaagtgaa
agagatatttatataggtgggactattgatattggtggggattatttagcttcaatgttt
gattatgttgctttagggcatcttcatataaatcaagttgttggaaataatgaacatgtt
agatattcaggttctcctatacctcttagtttttctgaatctaaaaatactcaaaaagta
aatcttgtatcttttactcaaaatgaaataagtatagaagaaatagaagttccactttct
aggaaacttgttattatcaaaggaaattacgagcatataaaaaatgaacttactaaaata
gaagataaaaactcttggatagaagttcatatatctgatgataatgcaatgtatgcaaat
aatgaaattagacaacttgcttcaaaacttgaacttatattacttgcagtaaaaatagat
aaaagtgaaaagcaattaaaagctaatgaattaaaagttataagtttagatgaattgtca
gttgaacaagtatttgaaaaaagattagaacttgaaaacttagaagataaagagtttgaa
aaagaactatttttgaattttaaagaagtagtttctaaggtgcaaagcctatga
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