Malaciobacter mytili: AMYT_2108
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Entry
AMYT_2108 CDS
T05895
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amyt
Malaciobacter mytili
Brite
KEGG Orthology (KO) [BR:
amyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyt03400
]
AMYT_2108 (phrB)
Enzymes [BR:
amyt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AMYT_2108 (phrB)
DNA repair and recombination proteins [BR:
amyt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AMYT_2108 (phrB)
Prokaryotic type
AMYT_2108 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AXH15657
LinkDB
All DBs
Position
complement(2146633..2148015)
Genome browser
AA seq
460 aa
AA seq
DB search
MILKVENKKTILWYRRDLRVEDVQLLSIEGEVLPIFIFDKEILNTLEKEDKRVDYIFKRV
LQLKENLRKINLDLLIFYAKPTEVFNYLKDYGFNEVYASIDYDNYAKNRDLEISKIIKFN
PLQDNYIYNVDEILKADKSPYVVFSPYFKEAKRIYVKEHSLEYKKQNNYLYNYSDFNFII
EFDSTKKLFKELKINSIGFNGNSIVYKNPKVLLEQLEFKIDKYEENRDFLNLDATSNLSL
DIRFGIISVREILRYLIKLKRQKHQTEGFFRQLVFRDFYAYLLFHFPKLHKEDFKKTAPY
SFDKELYESFISAKTGVPIIDAGVTELITTGNMHNRVRMIVASFFCKHLMLPWQEGEKFF
AKYLMDYDAASNILSWQWSSSTGVDAQPYFRVFNPYSQSKKFDKDAIYIKKYLPILKDIE
AKNLHDEEFLFNTEIKDYVKPIVKHSLARVNFLQKAKSIK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgatattaaaagtggaaaataaaaaaacaatattatggtatagaagagatttaagagta
gaagatgttcaacttttaagtattgaaggtgaagttcttcctatatttatatttgataaa
gagattttaaatactttagaaaaagaagataaaagagttgattatatttttaaaagagtt
ctacaattaaaagaaaatcttagaaaaattaacttggatttacttattttttatgcaaaa
ccaacagaagtttttaattatttaaaagattatggttttaatgaagtatatgcttctatt
gattatgataactatgcaaaaaatagagatttggaaatctctaaaataataaaatttaat
cctttgcaagataactatatttacaatgtagatgaaattttaaaagctgataaaagtcca
tatgtagtttttagtccatattttaaagaagcaaaaagaatttatgtaaaagaacactct
ttagagtataaaaaacaaaataattatttatataattatagtgattttaattttattata
gagtttgatagtactaaaaagcttttcaaagaattaaaaattaactcaattggttttaat
ggcaattcaatagtctataaaaatccaaaagttttattagaacaattggagtttaaaatt
gataaatatgaagaaaatagagattttttaaatttagatgctacttcaaatttaagttta
gatattagatttgggattattagtgttcgagagattttaagatatttaataaaattaaaa
agacaaaaacatcaaacagaaggattttttaggcaattggtttttagagatttttatgct
tatttactttttcattttcctaaattacataaagaagattttaaaaaaactgctccttat
agttttgataaagagttatatgagagttttattagtgcaaaaacaggagttcctattatt
gatgctggagtaactgagttaattacaacaggaaatatgcacaatcgagtaagaatgata
gtagctagttttttttgtaaacacttaatgttaccgtggcaagaaggtgaaaagtttttt
gctaagtatttaatggactatgatgctgcttcaaatatcttatcgtggcaatggagttct
agtacaggtgttgatgcacaaccatattttagggtatttaatccttattcacaaagtaaa
aaatttgataaagatgcaatatatataaaaaaatatttacctattttaaaagatattgaa
gcaaaaaatttacatgatgaagagtttttatttaatactgagattaaagattatgtaaaa
ccaatagtaaaacatagtttagcaagagtgaattttttacaaaaagcaaaaagcattaaa
taa
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