Malaciobacter mytili: AMYT_2695
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Entry
AMYT_2695 CDS
T05895
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amyt
Malaciobacter mytili
Pathway
amyt03410
Base excision repair
amyt03430
Mismatch repair
amyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMYT_2695 (recJ)
03430 Mismatch repair
AMYT_2695 (recJ)
03440 Homologous recombination
AMYT_2695 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyt03400
]
AMYT_2695 (recJ)
DNA repair and recombination proteins [BR:
amyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AMYT_2695 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMYT_2695 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AMYT_2695 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
HypF_C_2
CheZ
Motif
Other DBs
NCBI-ProteinID:
AXH16224
UniProt:
A0AAX2AEM3
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All DBs
Position
2793514..2795082
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AA seq
522 aa
AA seq
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MSKVTKQKLFEILLERHKENPCAKLADIPPPNQLKDIQKATKRIKQAILNNEKITIVGDY
DVDGVVSTTIMIDFFNKVGYKVDYIIPNRFEHGYGLSEKIVDLISEGLVITVDNGISAVV
AAKKLALKGIDLIITDHHTVGEELPQSYAIINPKQEECTFPFKEICGAQVAWYLCGAIKN
ELKLNINMGEFLDLLSVAIVADIMPMTNLNYTIVKHGLKKIKESKRAAFKKLDEVLSKKF
YMSDDIGFMIAPKINSAGRMDDASIALSFLLAKTEYEANEALNLLDELNNYRKTLQEEIT
KKAIKEINHNDNVIVVWGEDWHEGVIGIVASKLSNAYKKPAFVFSIKEGIAKGSARANAT
INLHTLITQCSSLLKGFGGHKNAAGLALEEKNLKEFQNKINSLVLDVSKEQLHIEYDSLG
ELDVSSVDLEFLSIIENFEPYGLDNKKPIFQVSNAKVLKSELIGKDKNHLKLLLNSDGFI
FEALRFHCDEPYTKENIDIIVSVSKNEFRGEVSAQFLIEDIL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagttacaaaacaaaaactttttgaaattcttttagaaaggcacaaggaaaac
ccttgtgctaaacttgcagatataccccctccaaatcaattaaaagatatacaaaaagct
acaaaaagaataaaacaagccatactaaataatgaaaaaatcacaatagtaggtgattat
gatgttgatggagtagtttcaacaacaattatgatagacttttttaataaagttggctat
aaagttgattatattattccaaatagatttgagcatggctatggcttatcagaaaaaatt
gttgatttaatttctgaaggattggtaataactgtagataatggaataagtgctgtagtt
gcagctaaaaaacttgctttaaaaggtatagatttaattattacagaccatcatacggta
ggagaagagttacctcaatcttatgccataattaatcctaaacaagaagaatgcactttc
ccttttaaagagatatgtggggctcaagttgcttggtatttatgtggtgcaattaaaaat
gaactaaagttaaatataaatatgggagagtttttagaccttttaagtgtagctatcgtt
gctgatattatgcctatgacaaatcttaattatactattgtaaaacatggtttaaaaaaa
ataaaagagtctaaaagagctgcttttaaaaaacttgatgaagttttatcaaaaaaattt
tatatgtctgatgatataggatttatgatagctccaaaaataaatagtgctggaagaatg
gatgatgcttctattgctttatcttttttacttgctaaaactgaatatgaagcaaatgaa
gctttaaatttattggatgagctaaataattatagaaaaactttacaagaagaaattaca
aaaaaagctataaaagagataaatcacaatgataatgtaatagtagtatggggagaagat
tggcatgaaggagttataggaattgttgcttcaaaactttcaaatgcttataaaaaacct
gcttttgttttctcaataaaagaaggtattgcaaaaggtagtgcaagagcaaatgctaca
ataaatcttcataccctaataacacaatgttcttctttacttaagggctttggaggacat
aaaaatgcagctggattagcccttgaagaaaaaaacttaaaagagtttcaaaataaaatc
aactctttagttttagatgtttcgaaagagcaattacatattgaatatgactctttagga
gaacttgatgtttcaagtgttgatttagagtttctttcaattatagaaaattttgaacct
tatggcttagataataagaaacctatttttcaagtatcaaatgcaaaagtattaaaaagt
gaattaataggaaaagataaaaatcatctaaaacttcttttaaatagtgatggatttatt
tttgaagcattaagatttcattgtgatgagccatatacaaaagaaaatattgatattatt
gtatcagttagtaaaaatgaatttagaggagaagtatctgctcagtttttaatagaagat
attttataa
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