Malaciobacter mytili: AMYT_a0128
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Entry
AMYT_a0128 CDS
T05895
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amyt
Malaciobacter mytili
Brite
KEGG Orthology (KO) [BR:
amyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyt03032
]
AMYT_a0128
03400 DNA repair and recombination proteins [BR:
amyt03400
]
AMYT_a0128
Enzymes [BR:
amyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMYT_a0128
DNA replication proteins [BR:
amyt03032
]
Prokaryotic type
DNA Topoisomerases
AMYT_a0128
DNA repair and recombination proteins [BR:
amyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMYT_a0128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
RPA_interact_C
Opy2
UPF0515
Motif
Other DBs
NCBI-ProteinID:
AXH16426
UniProt:
A0AAX2AHV4
LinkDB
All DBs
Position
pAMYT:complement(114226..116652)
Genome browser
AA seq
808 aa
AA seq
DB search
MDNFILVESKEIFEKFSKIIPSEFKIINLTEIYALKKNKIEILINEDDYNALSNAIKEAD
NLYIVYTDNYINFQEFYIKSFEDFEIEFFNKVTLDNLEINNIQYAFNAAIEIEHNEINYI
IARFKIDKIIKSNVSKILKWFFKKEQILTDEEAEKLDISRLILYAATIIIKNQDKINSFI
PDTYDKIGVDYIYENIQFRVKNNKKFKKDMQEELMMYFNIISDSKNEHTITNLDRKIKDI
PAPLPLTKTRLQKECSYLFGFSPKETLKIAKELFEGIEIAGEKISLITSINTNSTRIDKG
KKFQIYNLINKYFGKDFYFNGTREVKENSEYQLKEAIVPTKYEEEFFPDKIKSFLSEEQY
RIYYFIFWITICSEMSNAQMDASEIVVNIGTEKMKTESNKIIFEGWLVRGKELVTNLNIS
DTIVEIPLNLYPSMRLNDFKIDTVIYPVPERTPMRYSTGRFFEKTNKDILAEEEEISLLI
DDLLEQKLIVLRAKSMIEPTEKFNRIYYTLEEYAPELVNETFFIETFLALVKINEGKLEK
QVLIDMYMKQLSILREKLGYSEVKEFKEDNWKKEEAKKIAKENNQHLPKHVLDNNVILST
YIKENENRVEKFGICPNCKSGEICEKSKSFICNKCDFILWKNSVLKFFEIFGKDIEIEIF
KEYLKIILSKGKLLIENFYSKEVFFNKEITIEYSEKYNKWQVTFFNNKTKSNVQVIEENK
DIETKTNDEELNDDEELNKIIIDFNGIDENDLKNRFTYIKNIKIGSDTIIYFEGEDFVAI
KNFQNIKLYIEEKYNIKISEDFIKIDKE
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggataattttatattagtagaatctaaagaaatatttgaaaagttctctaaaataatt
cctagtgaatttaaaataattaatctcactgagatatacgctcttaaaaaaaataaaatt
gaaatactaataaatgaagatgattataatgctctttcaaatgcaattaaagaagcagat
aatttgtatattgtttacacagataattatattaattttcaagaattttatattaaatct
tttgaagattttgaaatagaattttttaataaagttacattagataatttggaaattaat
aatatacaatatgcatttaatgctgcaattgaaattgaacacaatgaaattaattacatc
attgcaagatttaaaatagataaaattataaaatcaaatgttagtaaaatactaaaatgg
ttctttaaaaaagaacagatattgactgatgaagaagcagaaaaattagatataagcaga
ttaatactttatgctgcaacaatcataataaaaaatcaagataaaatcaattcttttata
ccagatacttatgacaaaattggggttgactacatatatgaaaatatacaatttagagtg
aagaataacaaaaaatttaagaaagatatgcaagaagagttgatgatgtattttaacata
attagtgatagtaaaaatgaacatacaattactaatttagatagaaaaataaaagacatc
cctgcacctttacctctaacaaaaacaagacttcaaaaagagtgctcatatttattcggt
ttttcacctaaagaaaccttaaaaatagcaaaagagttatttgaaggcatagaaattgca
ggagaaaaaatatctttaataacatcaatcaatacaaatagtactagaattgataaggga
aaaaaattccaaatttataatcttattaataaatattttggaaaagatttttattttaat
ggaaccagggaagtaaaggaaaatagtgaatatcaactaaaagaagcaatagtcccaaca
aaatatgaggaagaattttttcctgataaaattaaatctttcttatcggaagaacaatat
agaatatattattttatcttttggattacaatttgttcagaaatgtcaaatgcccaaatg
gatgcaagtgaaatagtagttaatataggtactgaaaaaatgaaaactgaatcaaataaa
attatatttgaaggatggttggttagaggtaaagagttagtaaccaatctaaatataagt
gatacaattgttgaaattcctttaaatttatatcctagtatgagattaaatgattttaaa
attgatacagttatttatcctgtacctgaaagaacgccaatgagatattcaactggacgt
ttctttgaaaaaactaacaaggatattttagcagaagaagaagagatttctttattaatt
gatgatttactagaacaaaaattgatagttctacgtgctaaaagtatgattgagccaaca
gaaaaattcaatagaatttattatactttagaagaatatgcaccagaattagtaaatgag
acattctttattgaaacatttttagcattagtaaaaataaatgaaggcaaattagagaaa
caagtacttatagatatgtatatgaaacaattatctattttaagagaaaagttaggctat
tctgaagttaaagaatttaaagaagataattggaagaaagaagaagctaaaaaaatcgcc
aaagaaaacaatcagcatttgccaaagcatgtgttagacaacaatgtaatattgtcaaca
tacataaaagaaaatgaaaatagagttgaaaagtttggcatttgtccaaattgtaaatca
ggagaaatttgtgagaaaagtaaaagctttatatgtaataaatgtgattttatattatgg
aagaatagcgtattaaaattttttgaaatatttgggaaagacattgaaattgaaatattt
aaagaatacttaaaaataatattgtctaaaggaaagttattaattgagaatttctactca
aaagaggtcttttttaataaagaaataacaattgaatactctgaaaaatataataaatgg
caagttacattttttaataacaaaacaaaaagtaatgttcaagttatagaagaaaataaa
gatattgaaactaaaacaaatgatgaggaattaaatgatgatgaagaactaaataaaata
attattgattttaatggtattgatgaaaatgatttaaaaaatagatttacttatatcaaa
aatataaaaattggttctgatactataatttattttgaaggagaagattttgtggctatt
aaaaactttcaaaatataaaactatacattgaagaaaaatacaatatcaaaattagcgaa
gattttataaaaatagataaggaataa
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