Amycolatopsis sp. YIM 10: YIM_00005
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Entry
YIM_00005 CDS
T06270
Symbol
dnaA
Name
(GenBank) Chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YIM_00005 (dnaA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyy03032
]
YIM_00005 (dnaA)
03036 Chromosome and associated proteins [BR:
amyy03036
]
YIM_00005 (dnaA)
DNA replication proteins [BR:
amyy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YIM_00005 (dnaA)
Chromosome and associated proteins [BR:
amyy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
YIM_00005 (dnaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
IstB_IS21
AAA
AAA_22
DnaA_N
AAA_16
Hda_lid
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QFU85238
LinkDB
All DBs
Position
43..1722
Genome browser
AA seq
559 aa
AA seq
DB search
MSDHQLNLGVVWEQVVRELSDSTLSPQQRAWMRVTRPIGLLDGTALLAAPSDFAKEAIER
ALRGAITDALSRRLGREVSLAVKVETTDGAMGGSTSPPPPSRYSPSPGRGENGSAPRPPM
PGPRPHPPRPMPGPPPSPPLEGTAMPPGMPPTRSPRPDPAELARSHDQAEPMDDGDEEVD
EEGEALAAVHEIWPTFSGQPVAGQPYTAPAQPQTSKTRLNEKYTFDTFVIGASNRFAHAA
SVAVAEAPSRAYNPLFIWGESGLGKTHLLHAVGHYAQRLFPGMRVRYVSTEEFTNDFINS
LRDDRKVAFQRRYRDIDILLVDDIQFLEGKEGTQEEFFHTFNTLHNQNKQIVVSSDRPPK
RLETLEDRLRTRFEWGLITDIQPPELETRIAILRKKAAQDRLAVPGEVLEFIAARVEANI
RELEGALIRVTAFASLNQQPVDVGLAEIVLRDLIPDSQAPEISAPTIMGVTAEFFDVSLD
ELCGPGKTKALATARQIAMYLCRELTDMSLPRIGQTFGGRDHTTVMHAAKKIRKEMAERR
RIYDQVQELTSRIKQRARQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccaccagttgaacctgggtgtggtctgggagcaggtcgttcgcgaactgtcc
gacagcacgctctccccccagcaacgcgcctggatgcgcgtgaccaggccgatcggcctg
ctggacggcaccgcactgctcgccgcgccgagcgacttcgccaaggaagccatcgaacgg
gccctgcgcggggcgatcaccgacgcgctctcccgccgcctcggccgggaggtctcgctc
gcggtcaaggtggaaaccaccgacggcgcgatgggcggctccacttcgccgccaccaccc
agccggtactcaccctcccccggacggggggagaacggctccgctccgcgaccaccgatg
cccggtccgcgcccccacccgccgcggccgatgcccggaccgccgccgtccccgccgctc
gagggcaccgcgatgccccccggcatgccgccgacccgcagcccccgccccgaccccgcc
gaactggcccgttcgcacgaccaggccgagccgatggacgacggcgacgaagaagtggac
gaagagggcgaggccctcgccgcggtgcacgagatctggccgaccttctccggtcagccg
gtggctggccagccctacaccgcccccgcgcaaccgcagacctcgaagacccgcctgaac
gagaagtacaccttcgacacctttgtcatcggcgcgtcgaaccggttcgcgcacgcggcg
tcggtcgccgtcgccgaagcgccgtcgagggcgtacaacccgctgttcatctggggcgag
tccgggctcggcaagacgcacctgctgcacgcggtcgggcactacgcccagcggctgttc
cccgggatgcgcgtgcggtacgtctccaccgaggaattcaccaacgacttcatcaactcc
ctgcgcgacgaccgcaaggtggccttccagcgccgctaccgcgacatcgacatcctgctc
gtcgacgacatccagttcctcgagggcaaggaaggcacgcaggaggagttcttccacacc
ttcaacaccctgcacaaccagaacaagcagatcgtggtctcctccgaccgcccgccgaag
cggctggaaaccctggaggaccggctgcgcacgcggttcgagtggggcctgatcaccgac
atccagccgcccgagctggaaacccgcatcgccatcctgcgcaagaaggccgcccaggat
cggctcgcggtgcccggtgaggtgctggagttcatcgcggccagggtcgaggcgaacatc
cgcgagctcgaaggcgcgctcatccgcgtcaccgcgttcgcctcgctgaaccagcagccg
gtcgacgtcggcctcgcggagatcgtgctgcgggacctgatcccggattcgcaggcgccg
gagatcagcgcgccgacgatcatgggcgtcaccgcggagttcttcgacgtctccctagac
gaactctgcggccccggtaaaacgaaggcgctcgccaccgcgcgccagatcgccatgtac
ctgtgccgcgagctgaccgacatgtcgctgccgcggatcggccagaccttcggcggccgc
gaccacaccacggtgatgcacgcggcgaagaagatccgcaaggagatggccgagcgccgc
cggatctacgaccaggtgcaggagctgacctcccgcatcaagcagcgcgcccgccagtag
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