Amycolatopsis sp. YIM 10: YIM_00040
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Entry
YIM_00040 CDS
T06270
Symbol
gyrA1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyy03032
]
YIM_00040 (gyrA1)
03400 DNA repair and recombination proteins [BR:
amyy03400
]
YIM_00040 (gyrA1)
Enzymes [BR:
amyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YIM_00040 (gyrA1)
DNA replication proteins [BR:
amyy03032
]
Prokaryotic type
DNA Topoisomerases
YIM_00040 (gyrA1)
DNA repair and recombination proteins [BR:
amyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YIM_00040 (gyrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
TPD52
Motif
Other DBs
NCBI-ProteinID:
QFU85245
UniProt:
A0A5P9PAW1
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Position
9413..11926
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AA seq
837 aa
AA seq
DB search
MTETLPPENDRVEPVDIQQEMQRSYIDYAMSVIVSRALPDVRDGLKPVHRRVLYSMYDSG
FRPDRGYNKCSRVVGDVMGNYHPHGDSAIYDALVRLAQPWSMRYPLIDGQGNFGSSGNDP
AAAMRYTEARLAPLAMEMLRDIDEDTVDFSDNYDGRTQEPDVLPARFPNLLVNGGSGIAV
GMATNIPPHNLNEVADGVIWALEHPDATEDELLAALLQRIKGPDFPTKGLILGHAGIEDA
YRTGRGSVRMRAVVEVEEDAKGRTILVVTELPYQVNPDNLVENIANLVRDGKLTGIADIA
DESNSRRGMRIVVTLKRDAVAKVVLNNLYKHTQLQYNFGVNMLALVDGVPRTLRLDQIIR
HYVKHQIEVIVRRTKFRLRKAEERAHILRGLVKALDMLDEVIALIRQSPSADEARAGLIE
LLDVDEVQATAILDMQLRRLAALERQKIVDELNKIETEIADLKDILDKPERQRQIISDEL
TEIVGKYGNERRTQIIPFDGEVSIEDLIAVEDVVVTITRTGYAKRTKTDLYRSQRRGGKG
VQGATLKQDDIVQHFFVCSTHDWILFFTNKGRVYRAKAYDLPEANRNARGQHVANLLAFQ
PDEQIASVIQIKDYQVAPYLVLATRKGLVKKTKLADFDSNRSGGLIGVNLREGDELVGAV
LVSAEDDLLLVSSDGQSIRFHATDEALRPMGRATSGVLGMRFNDGDELLGINVVAPDKFL
LVATDGGYAKRTPIEDYPIQGRGGKGVLTIQHDQRRGRLVAALIVDVDDELYAITSSGGV
IRTPAEQVRKAGRQTKGVRLMNLGEGTTLLAVARNADEPSDVNGAAGGDDDTQEPQE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccttgccgccggagaacgaccgcgtcgaaccggtcgacatccagcaggag
atgcagcgctcctacatcgactacgcgatgagcgtgatcgtgtcgcgggcgctgccggac
gtgcgcgacggcctcaagccggtgcaccggcgcgtgctgtactcgatgtacgactccggg
ttccggcccgaccgcgggtacaacaagtgctcgcgcgtggtcggcgacgtgatgggcaac
taccacccgcacggcgactcggcgatctacgacgcgctggtccgcctcgcgcagccgtgg
tccatgcggtacccgctgatcgacggccagggcaacttcggctcgtcgggcaacgacccc
gccgccgccatgcggtacaccgaggcccgcctcgcgccgctggcgatggagatgctccgc
gacatcgacgaggacaccgtcgacttctcggacaactacgacggccgcacccaggaaccg
gacgtgctgcctgcccggttcccgaacctgctggtcaacggtggttccgggatcgcggtc
gggatggcgacgaacatcccgccgcacaacctgaacgaggtcgccgacggggtgatctgg
gcactggagcacccggacgccaccgaggacgagctgctcgccgcgctgctgcagcggatc
aagggcccggacttcccgaccaagggcctgatcctcgggcacgccggcatcgaggacgct
taccgcaccggccgcggctcggtgcgcatgcgcgcggtggtcgaggtcgaggaggacgcc
aaggggcgcaccatcctcgtcgtcaccgaactgccctaccaggtcaacccggacaacctg
gtggagaacatcgccaacctggtccgggacggcaagctcaccggcatcgcggacatcgcc
gacgagtcgaacagccgccgcggcatgcgcatcgtggtcacgctcaagcgcgacgcggtg
gccaaggtggtgctgaacaacctctacaagcacacccagctgcagtacaacttcggcgtc
aacatgctggcgctggtcgacggcgtgccgcgcacgctgcggctcgaccagatcatccgg
cactacgtcaagcaccagatcgaggtcatcgtccgccggaccaagttccggttgcgcaag
gccgaggaacgcgcgcacatcctgcgtggtctggtcaaggcgctggacatgctcgacgag
gtgatcgcgctgatccgccagtcgccgtcggccgacgaggcgcgggccgggctgatcgag
ctgctcgacgtggacgaggtgcaggccaccgcgatcctcgacatgcagctgcgccggctc
gccgcactcgagcggcagaagatcgtcgacgagctgaacaagatcgagaccgagatcgcc
gatctgaaggacatcctggacaagccggagcgccagcggcagatcatctcggacgagctg
accgagatcgtcggcaagtacggcaacgagcggcgcacgcagatcatcccgttcgacggc
gaggtctccatcgaggacctgatcgcggtcgaggacgtggtggtcaccatcacccgcacc
gggtacgccaagcggacgaaaaccgatctgtaccgctcgcagcggcgcgggggcaagggc
gtgcagggcgccacgctcaagcaggacgacatcgtccagcacttcttcgtctgctccacg
cacgactggatcctgttcttcacgaacaagggccgcgtctaccgcgcgaaggcgtacgac
ctgccggaggccaaccgcaacgcgcgcggccagcacgtggccaacctgctggccttccag
ccggacgagcagatcgccagcgtcatccagatcaaggactaccaggtcgcgccgtacctg
gtgctggcgacgaggaagggcctggtcaagaagaccaagctggccgacttcgactcgaac
cgctccggcggcctgatcggcgtcaacctccgcgagggcgacgaactggtcggcgcggtg
ctggtctccgccgaggacgacctgctgctggtctcctcggacggccagtcgatccgcttc
cacgccaccgacgaggcgctgcggccgatgggccgcgccacctcgggtgtgctgggcatg
cggttcaacgacggtgacgaactgctcggcatcaacgtggtcgccccggacaagttcctg
ctggtcgccacggacggcggttatgccaagcgcaccccgatcgaggactacccgatccag
ggccgcggcggcaagggcgttctgaccatccagcacgaccagcgccgtggcaggctggtg
gcagcactcatcgtcgatgtcgacgacgagctctacgccatcacctccagtggcggtgtc
atccgcaccccggcggagcaggtgcgcaaggccgggcggcagacgaagggcgtgcgactg
atgaatctcggggaaggcaccacccttctcgcggtcgcgcgcaacgcggacgagccgtca
gacgtcaacggtgcggccggaggagacgacgacacgcaggagccacaggagtag
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