Amycolatopsis sp. YIM 10: YIM_00850
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Entry
YIM_00850 CDS
T06270
Symbol
cydD1
Name
(GenBank) ATP-binding/permease protein CydD
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_00850 (cydD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_00850 (cydD1)
Transporters [BR:
amyy02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
YIM_00850 (cydD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
AAA_22
AAA_25
RsgA_GTPase
nSTAND1
AAA_23
Cellulase
Motif
Other DBs
NCBI-ProteinID:
QFU85403
UniProt:
A0A5P9PB67
LinkDB
All DBs
Position
170491..173760
Genome browser
AA seq
1089 aa
AA seq
DB search
MTPGRTTLPAKKLSTVDKVRPGPGPLGALPSLSPVARRALALAAVLAAANAALLVAQAFL
LASILASIVGGGEEIGGRTAWLLGAVGGRALVGWAVRVVSARAAAGAKEELRAKVVDHAA
ALGPEWIAARGTGELTALTTRGLDALDAYFTTYLPALVTAAVVPVGAGAAVLFADWPSAV
LIAVTLPLLPMFAILVGKYTADRVSDATEATHRLSGRLLELIRALPVLAAFRRAGAQAEV
VRRVSDRHRRDTLKTLRVAFSSAFVLELAATLSVALVAVVIGVRLVSGDLTLAIGLGVLI
LAPECFQPLRNAGAAFHASEDGVEAVRRVAEVLAEPVPAPGARKIHKGQIEVRDLRVLRR
GGFAPDGETFTADPGEITWLRAPSGAGKSTTLAALLGFVQPESGSVTIGGQPLAEADLAH
WRRQVAWVPQSPAFTGGTVREELRLALADQEVEPAEDELLSVLVAVWLSGQVDQPVSHLS
TGQRQRVAVARALLRARYGAWLLLLDEPTAHLDAASARRVQKAIKEVADSGATVVIAAHD
RLTSFAEDEPAEATTAADAPAEPDAKPIGLRRLVDRAFLTGAGLGAAAFLAGIALTATSG
WLIAKASQQPPILTLTVAVVGVRTFGLARAGLRYLERLATHDGAFRTATSLRVDLWRALV
RIGPVGTSALRDGEGQRRLVSDVDTVRDLLPRVVSPPLVAVLVVAGAVAVQTAVLPIAGL
YLAVAALVAGLLAPALALLLERRSTSALAEGRRDVSARVLTLFEGAAELLAFGAYRRQQQ
ALAHADDQLTAGTRRQAFGAGAADALVVLAMGGAAVAATLAAAASGALNPVLAPIVALVP
LALAEVLLQLPPVAQHWDELRRARTRLAAVLTAPDGPRPEHAEDVELTGVDVRWPGAPEP
VLKDVTLTIPRGATVAITGPSGAGKSSLLALLLGFLAPERGSVRTPGAVAWAPQEPGLVA
TTVAENLRLADPHATPERLRAALTTAGLADLPAETLLGSGGAGLSGGQAQRVALARALLA
AESSALVLLDEPTSHLDEQTAYEVRAGLAAALAGRTVVWVTHRMEEAAAADLHLDVRDGR
VHVLSRSGV
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgactcccggccgcaccacccttcccgccaagaagttgtccacagtggacaaagtgcgg
ccggggcccggcccgctcggcgcgctgccttccctttcgccggtggcgcgccgggcgctg
gccctcgccgcggtgctggccgcggccaacgccgcgctgctggtggcgcaggcgttcctg
ctggcttcgatcctcgcctcgatcgtcgggggcggcgaggagatcgggggccgcaccgcc
tggctgctcggcgccgtgggaggacgtgcgctggtcggctgggcggtgcgggtggtttcc
gcgcgggccgcggccggcgccaaggaggaactgcgcgccaaagtggtcgaccacgccgcg
gcactcggtccggagtggatcgccgcccgcggcaccggtgagctgaccgcgctgaccacc
cgcggcctcgacgcgctcgacgcctacttcaccacctacctgcccgcactggtcaccgcc
gcagtggtgccggtcggcgcgggggcggcggtgctgttcgccgactggccttcggcggtg
ctcatcgcggtgactctgccgctgctgccgatgttcgcgatcctggtcggcaagtacacc
gcggaccgggtcagtgacgcgaccgaggccacgcaccgactttccggtcgtctgctggaa
ctgatccgcgcgctcccggtgctcgccgcgttccgccgtgccggggcgcaggccgaggtg
gtgcgccgggtttccgaccggcaccgccgcgacaccctgaaaaccctgcgcgtggcgttc
tcctcggccttcgtgctcgaactggccgcgacgctttcggtggcgctggtcgccgtggtg
atcggggtccggctggtctccggtgacctgaccctggccatcgggctgggcgtgctcatc
ctggcgcccgagtgctttcagccgctgcgcaacgccggtgccgccttccacgccagcgaa
gacggggtcgaggcggtgcgccgggtcgccgaagtgctcgccgaaccggtgcccgccccc
ggtgcccggaagatccacaaaggacagatcgaggtccgggacctgcgggtgctccgccgg
ggcgggttcgcgcccgatggcgagaccttcaccgccgaccccggcgagatcacttggctg
cgcgcgccgagcggcgccgggaagtccaccacgctcgccgcgttgctcggcttcgtgcaa
ccggaatcgggttcggtcaccatcggcgggcagccgctcgccgaagccgacctcgcgcac
tggcgccgccaggtggcctgggtgccgcagtcgcccgcgttcaccggcggcacggtccgc
gaagaactccgcctcgcgctggccgaccaggaggtcgaaccggcagaggatgagttgctc
agtgtcctagtggctgtgtggctgagtggccaagtggatcagccagtcagtcacctgtcc
actggccagcggcagcgggtggcggtcgccagggcgctgctgcgggcccggtacggggcc
tggctcctgctgctcgacgagccgaccgcccatctcgacgccgcatcggcgcgccgagtg
cagaaggcgatcaaagaggtagccgacagcggggccaccgtggtgatcgccgcccacgac
cggctgacctccttcgccgaagacgaaccggccgaggcaaccaccgcggcggacgcacct
gccgaacccgacgccaagccgatcggcctgcgccgcctcgtcgatcgcgcgttcctgacc
ggggccgggctcggcgcagcggcgttcctcgccgggatcgcgctgaccgcgacgtccggc
tggctgatcgccaaggcgtcgcagcaaccgccgatcctcaccctgaccgtcgcggtggtc
ggcgtgcgcaccttcggtctcgcgcgcgccggactccgctacctcgaacggctcgccacc
cacgacggcgccttccgcaccgccaccagcctccgcgtcgacctgtggcgcgcgctggtg
cgcatcggcccggtcggcaccagcgccctgcgcgacggtgagggccagcgccgcctggtg
tccgatgtggacaccgtgcgcgacctgctgccgagggtggtctcgccgccgctggtcgcg
gtactggtggtggcgggcgcggtggccgtgcagaccgcggtgctgccgatcgccgggctc
tacctcgcggtcgcggcgctggtcgccggactgctcgcccccgcactcgccctcctgctc
gaacgccgctcgacctcggcgctcgccgaaggacggcgtgacgtgtcggcccgtgtcctc
accctgttcgaaggtgccgcggaactgctcgcgttcggtgcctatcggcgacagcagcag
gccctcgcccacgccgacgaccagctgaccgcgggcacgcgccgccaggcattcggtgcc
ggtgccgccgacgcgctggtggtgctcgccatgggcggtgcggcagtcgctgccacattg
gcagctgctgccagcggcgcgctgaacccggtgctcgcgccgatcgtcgcgctggtgccg
ctggcgctcgccgaggtgctactccaactgccgccggtcgcccagcactgggacgaactc
cgccgcgcccgtactcggctcgcggccgtcctcactgccccggacggtccgcggcccgag
cacgccgaggacgtcgagctgaccggcgtcgacgtgcgctggccgggtgcgcccgagccg
gtgctgaaggacgtcacgctgaccattccgcgaggggcgacggtggcgatcaccggaccg
tcgggcgcgggcaagtcgagcctgctcgcgctgttgctgggcttcctcgcgccggaacgc
ggaagcgtgcgcacgccgggcgcggtcgcctgggccccgcaggaacccgggctcgtggcg
accaccgtcgccgagaatctgcgcctggccgacccgcacgcgactcccgagcggttgcgc
gccgcgctcaccaccgccggactcgccgatctgcccgccgaaaccctgctgggcagcggg
ggcgcgggcctatccggtgggcaggcgcagcgggtcgcgttggcgagagcactgctcgcc
gcagagagcagcgctctcgtactgctcgacgagccgacttcgcacctcgacgagcagacc
gcctacgaggtccgagccggactcgcggcggcgctggcgggcagaaccgtggtctgggtc
acccaccgcatggaagaggccgccgccgcggatctgcacctcgacgtgcgggacgggcga
gtgcacgtgctgtcgcgaagcggtgtttaa
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