KEGG   Amycolatopsis sp. YIM 10: YIM_01550
Entry
YIM_01550         CDS       T06270                                 
Symbol
vsr
Name
(GenBank) Very short patch repair protein
  KO
K07458  DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
amyy  Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:amyy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amyy03400]
    YIM_01550 (vsr)
DNA repair and recombination proteins [BR:amyy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     YIM_01550 (vsr)
SSDB
Motif
Pfam: Vsr MTES_1575 DUF559
Other DBs
NCBI-ProteinID: QFU85540
LinkDB
Position
315410..315808
AA seq 132 aa
MRANRRSDTKPEVALRKELHRLGYRYRKDMRLDLGEGVRVRPDIVFTARRIAVFVDGCFW
HVCPEHGREPTSNEWYWTPKLRRNQERDRIATSSLEQAGWRVVRIWEHEPLPAAVAVVTE
AVKHAFDPKPED
NT seq 399 nt   +upstreamnt  +downstreamnt
atgcgcgccaaccggcgctccgacacgaagcctgaagttgctctccgtaaggagttgcat
cggcttggttatcgctaccgcaaggacatgcggctcgacctcggcgagggtgttcgagtg
cggccggacatcgtcttcacggcccgccggatcgcggtcttcgtggacggttgcttctgg
catgtctgccccgagcacggccgggagccgacgtccaacgagtggtactggacgcccaag
ctccggcgcaaccaggagcgcgaccgcattgccaccagttccctcgagcaggctggctgg
cgggtcgtgcgcatctgggagcacgagccgctgccggccgcggtggccgtggtcactgag
gcggtcaaacacgcgttcgatcctaagccggaggattag

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