Amycolatopsis sp. YIM 10: YIM_01965
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Entry
YIM_01965 CDS
T06270
Symbol
recR
Name
(GenBank) Recombination protein RecR
KO
K06187
recombination protein RecR
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YIM_01965 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyy03400
]
YIM_01965 (recR)
DNA repair and recombination proteins [BR:
amyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YIM_01965 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
YIM_01965 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
zf-HIT
Motif
Other DBs
NCBI-ProteinID:
QFU85620
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All DBs
Position
390683..391279
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AA seq
198 aa
AA seq
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MYEGVVQDLIDELGRLPGVGPKSAQRIAFHLLGADPVDIGRLQEVLGKVKEGVQFCEICG
NVSEQVNCRICRDTRRDLSLICVVEEPKDVLAVERTREFKGRYHVLGGSLDPLSGIGPEQ
LRMRELLARIGGEEVTEVIIATDPNTEGEATATYLVRMLRDFPGLTVTRLASGLPMGGDL
EFADELTLGRALSGRRAL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgaaggggtagtccaggacctcatcgacgagctcgggcggctgcccggggtcggg
ccgaagagcgcccagcgcatcgccttccacctgctcggtgccgatccggtggacatcggc
cggttgcaggaggtgctgggcaaggtcaaggagggcgtgcagttctgcgagatctgcggc
aacgtctccgagcaggtcaactgccgcatctgccgcgacacccggcgcgacctctcgctg
atctgcgtggtcgaggagcccaaggacgtgctcgcggtggagcgcacccgcgagttcaag
ggccgctaccacgtgctcggcggctcgctcgacccgttgtccggcatcggcccggagcag
ttgcgcatgcgtgagctgctggcccgcatcggcggtgaggaggtcacggaggtcatcatc
gccaccgacccgaacaccgagggcgaggccaccgcgacctacctggtccgcatgctgcgc
gacttccccggcctgaccgtcacgcggctggcctccggcctgccgatgggcggtgacctg
gagttcgccgacgaactgaccctggggcgggcgctttcgggacgccgcgccctgtga
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