Amycolatopsis sp. YIM 10: YIM_03935
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Entry
YIM_03935 CDS
T06270
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyy03400
]
YIM_03935 (phrA)
Enzymes [BR:
amyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
YIM_03935 (phrA)
DNA repair and recombination proteins [BR:
amyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
YIM_03935 (phrA)
Prokaryotic type
YIM_03935 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QFU86009
UniProt:
A0A5P9PCL8
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All DBs
Position
781044..782453
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AA seq
469 aa
AA seq
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MAGNAPVILWFRRDLRLGDHAALLAAAKSASRVLALYVLDDALLKPSGAPRVAFLHGCLR
ALDEQLSGRLLVVRGDPVRVLPEIAAAIGARGVHVHADTAPYGRKRDRAVAAELERHGVD
WVETGSSYAITPGRITKPARRPPPPSTERSAPTLIQGEPYRVFTPFFRAWLRHGWPSPAA
TSASTVDWITPDGLPGVDLPADPDLGSMRLPEPGERAALATWERFREEGLAGYDTQRDRP
DVEGSSRMSPYLRWGCVHPRTLLAELADEDEAFRAELAWREFHADVLWHRPETARRNYNS
RFDGMKYETGAAARSAFEAWCEGRTGYPVVDAGMRQLLAEGWMHNRVRMIVASFLVKDLH
LPWWWGARHFMRHLVDGDLASNQLNWQWVAGSGTDAAPYFRIFNPTTQGEKFDPGGDYVR
RYVPELAGLSGKTVHQPWKAGPPDGYPAPVVEHAHERRVALERYGDLSP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaacgctccagttatcctgtggttccgccgggatctgcggctgggtgatcac
gcggccctgctggccgcggcgaaatcggcgagtcgtgtgctcgcgctctacgtgctcgac
gacgcgctgctgaagccgtccggggcgccgagggtcgccttcctgcacggctgcctccgc
gcgctggacgagcagctttccgggcgcctgctggtggttcgcggtgatcccgtccgggtg
ctgcccgagatcgccgcggcgatcggtgcgcgtggtgtgcacgtccacgccgacaccgcg
ccctacggccggaagcgcgatcgcgcggtcgccgcggagttggagcgccacggggtcgac
tgggtggagacggggtcttcctacgccatcaccccgggccgcataaccaagcccgcccgt
cgcccaccgccaccctcaacggagcgctccgcgccgaccttgatccaaggcgaaccgtat
cgcgtgttcaccccgttcttccgcgcgtggctgcgccacggctggccctctccggccgcc
acctccgcgtccacagtggactggatcaccccggacggactgcccggcgttgaccttccc
gccgatccggatctgggctcgatgcgcctgccggagccgggggagcgggccgcgctggcg
acctgggaacgcttccgggaggaaggcctcgccggctacgacacccagcgcgaccggccg
gacgtcgaaggttccagccggatgtctccctacctgcgctggggatgcgtgcacccgcgc
accctgctcgccgagctggcggacgaggacgaggccttccgcgccgaactggcctggcgc
gagttccacgcggacgtgctctggcaccggccggaaaccgcgcgccgcaactacaactcg
cgcttcgacgggatgaagtacgagaccggcgccgccgcgcgctcggccttcgaagcgtgg
tgcgagggacgcacggggtacccggtggtcgacgccgggatgcgccagctgctcgcggag
ggctggatgcacaaccgggtgcggatgatcgtcgccagcttcctggtcaaggacctgcac
ctgccgtggtggtggggcgcgcggcacttcatgcggcacctggtcgacggtgacctcgcc
tcgaaccagctgaactggcagtgggtggcgggcagcggcaccgacgccgcgccgtacttc
cggatcttcaacccgaccacccagggcgagaagttcgatcccggcggcgactacgtccgg
cggtacgtgcccgaactcgccggcttgtccggcaaaaccgtgcaccagccgtggaaagcg
ggcccgccggacggctacccggcgcccgtggtcgagcacgcccacgaacgccgggtggcc
ttggaacgctacggcgacctcagcccttga
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