Amycolatopsis sp. YIM 10: YIM_04085
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Entry
YIM_04085 CDS
T06270
Symbol
ideR1
Name
(GenBank) Iron-dependent repressor IdeR
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyy03000
]
YIM_04085 (ideR1)
Transcription factors [BR:
amyy03000
]
Prokaryotic type
Helix-turn-helix
Other families
YIM_04085 (ideR1)
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Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
MarR
HTH_Crp_2
HTH_IclR
MarR_2
HVO_A0261_N
HTH_24
Rrf2
PglZ_C
FeoC
CggR_N
HTH_20
RHH_5
GntR
TrmB
Motif
Other DBs
NCBI-ProteinID:
QFU86039
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Position
812069..812758
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AA seq
229 aa
AA seq
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MSDSTTRRSSSIEDYVRAIYGLVERGEAVTNTSLAGRLEVSPSSVSGMVTKLAQQGLVAH
VPYRGIELTAEGRLLARAVLRRHRLIETYLVSELGYTWDEVHAEADALEHAVSDRLVERI
AAKLGNPVRDPHGDPIPAADGSIEELQTAILDELQPGVVGEIVRVWDTDPDLLRYLTEHA
INLGERIEVVERQPFGGPIVVKVGSPPDAATHALGKEIAQALSVAVRAR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcaccactcgccgatcgtcgtccatcgaggactacgtccgggcgatctac
gggctggtggagcgcggcgaggcggtgacgaacacctcgctggccggacggctggaggtg
agcccgtcctcggtgtcgggcatggtcaccaagctcgcccagcagggcctggtcgcgcac
gtgccctaccgcggcatcgagctgaccgccgagggcaggctgctggcccgcgcggtgctg
cggcggcaccggctgatcgagacgtacctggtctccgagctgggctacacctgggacgag
gtgcacgccgaggcggacgcgctcgagcacgccgtgtcggaccgcctggtcgagcgcatc
gcggcgaagctgggcaatcccgtccgcgacccgcacggcgaccccatcccggccgccgac
ggcagcatcgaggagctgcagaccgccatcctggacgaactgcagccgggagtggtcggc
gagatcgtgcgtgtctgggacaccgaccccgatctgctgcgctacctcaccgagcacgcg
atcaatctcggtgagcgcatcgaggtggtcgagcgccagccgttcggcggcccgatcgtg
gtcaaggtcggctccccgccggacgccgcgacgcacgcgctgggcaaggagatcgcgcag
gcgctgagcgtggccgtccgcgcccgctga
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