Amycolatopsis sp. YIM 10: YIM_04865
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Entry
YIM_04865 CDS
T06270
Symbol
oppD3
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy01501
beta-Lactam resistance
amyy02010
ABC transporters
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_04865 (oppD3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_04865 (oppD3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YIM_04865 (oppD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_04865 (oppD3)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
YIM_04865 (oppD3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
Sigma54_activat
DUF87
Motif
Other DBs
NCBI-ProteinID:
QFU86192
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Position
967854..968837
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AA seq
327 aa
AA seq
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MDRLLEIDDLRVEFRTSEGVASVLNGVSYHVDAGETLAVLGESGSGKSVTAQAVLGILDM
PPAVITGGSIRFRGEDLLGVGARRRREVRGGGIAMIFQDALSALNPVFTVGFQIEEQLRL
RKGMSRRAARARAVELLDLVHIPNAASRVREYPHQFSGGMRQRAMIAMALALDPELLIAD
EPTTALDVTVQAQIMDLLAEIQAERRMGLVLITHDLGVVAEVADRIAVMYAGRIVEQSDV
HTLFRSPAHPYTAALMNSLPRLDLKGQSLETIKGLPPSLLDIPAGCPFHPRCKRAEHICS
TDLPPVLEPEAGRYSACHFAPEVMRGE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggacagactgctggagatcgacgacctgcgcgtggagttccgcacgtccgaaggggtg
gcgagcgtgctcaacggcgtgagttaccacgtggacgcgggggagaccctggccgtgctc
ggcgaatcggggtcgggcaagagcgtgaccgcgcaggcggtgctgggaattctcgacatg
ccgcccgcggtgatcaccggcggctcgatccggttccgcggcgaggacctgctcggggtt
ggtgcccgtcgtcgccgtgaggtgcgcggtggcggcatcgcgatgatcttccaggacgcg
ctttcggcgttgaacccggtgttcaccgtggggttccagatcgaggagcagctgcggttg
cgcaagggcatgagccggcgggcggcgcgggcgcgggcggtcgagctgctggacctggtg
cacatcccgaacgcggcttcgcgggtgcgggagtatccgcaccagttctcgggcgggatg
cggcagcgggcgatgatcgcgatggcgctggcgctggacccggaactgctgatcgcggac
gagccgacgaccgcgctggacgtgaccgtgcaggcgcagatcatggacctgctggcggag
atccaggcggagcggcggatgggcctggtgttgatcacgcacgatctgggggttgtcgcc
gaagtggccgatcggatcgccgtcatgtacgccggtaggattgttgaacaatccgacgtg
catactttgttccgatcccccgcgcacccctatacggcggcgctgatgaactcgctgccc
cgcctggacctgaaggggcagagcctggaaacgatcaagggcctgccgccgagcctgctg
gacatcccggcgggctgccccttccacccgcgttgcaaacgggcggagcacatctgctcc
accgacctgccccccgtcctggaaccggaggcgggccggtacagcgcctgccacttcgcc
cccgaggtgatgcgaggtgagtga
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