Amycolatopsis sp. YIM 10: YIM_05235
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Entry
YIM_05235 CDS
T06270
Symbol
fumC
Name
(GenBank) Fumarate hydratase class II
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00020
Citrate cycle (TCA cycle)
amyy00620
Pyruvate metabolism
amyy00720
Other carbon fixation pathways
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01120
Microbial metabolism in diverse environments
amyy01200
Carbon metabolism
Module
amyy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amyy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YIM_05235 (fumC)
00620 Pyruvate metabolism
YIM_05235 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
YIM_05235 (fumC)
Enzymes [BR:
amyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
YIM_05235 (fumC)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
QFU86265
UniProt:
A0A5P9PDL1
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Position
complement(1042331..1043728)
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AA seq
465 aa
AA seq
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MPEQEFRIEHDTMGEVKVPVDALYRAQTQRAVENFPISGRGLERAQIRALGLLKAATARV
NAKLGVLDEDLATAIAAAADEVAEGRHDAHFPIDVFQTGSGTSSNMNANEVIATLATRAL
GRDVHPNDHVNASQSSNDTFPTTIHVAATEAVLSNVIPALEHLAQAIEARAAEWADVVKS
GRTHLMDAVPITLGQEAGAWASQVRFGIERLRSGLDRLGELPIGGTAVGSGLNAPDGFGA
AVAAELAQVTGLPLTEARDHFEAQATQDGVVETSGHLRTVAVSLNKIANDLRWLGSGPRT
GLAELALPDLQPGSSIMPGKVNPVIPEATLQVVAQVIGNDAAVAFAGAQGNFQLNVNLPV
IARNVLESARLLAAVSRLLADKVFAGVTVNTDRAREYAEGSPSIVTPLNKYIGYEEAAAV
AKQALKELKTIREVVIERGHVADGKLTEAQLDEALDVLRMARGGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacaggaattccggatcgaacacgacacgatgggcgaagtgaaagtgcccgtc
gacgcgctgtaccgagcccagacgcaacgcgccgtggagaacttcccgatctccggccgc
ggcctggaacgcgcccagatccgcgcgctcggcctgctcaaggccgcgaccgcgcgggtg
aacgccaagctcggcgtgctcgacgaggacctcgccaccgcgatcgccgcggccgccgac
gaggtcgccgaaggcaggcacgacgcccacttcccgatcgacgtgttccagaccggttcc
ggcacctcgtcgaacatgaacgccaacgaggtgatcgcgacgctggccacccgcgccctc
ggccgcgacgtgcacccgaacgaccacgtcaacgcctcgcagtcgtccaacgacaccttc
ccgaccaccattcacgtggccgccacggaagcagtgctctcgaatgtgatccctgctctc
gaacacctcgcgcaggccatcgaggcccgtgccgcggagtgggcggacgtggtcaagtcc
ggccgcacgcacctgatggacgccgtgccgatcacgctcggccaggaggccggggcgtgg
gcctcgcaggtgcgcttcggcatcgagcggctgcgctccgggctggaccggctcggcgaa
ctgccgatcggcggcaccgcggtcggttccggcctcaacgccccggacggcttcggcgcc
gcggtcgcggccgaactggcccaggtgaccggcctcccgctgaccgaggcccgcgaccac
ttcgaggcgcaggccacccaggacggcgtggtggagacctccggccacctgcgcacggtc
gccgtctcgctgaacaagatcgcgaacgacctgcgctggctgggttccggcccgcgcacc
gggctcgccgagctggcgctgccggacctgcagccgggctcgtcgatcatgccgggcaag
gtcaacccggtcattccggaggccaccctgcaggtggtcgcgcaggtgatcggcaacgac
gcggcggtggccttcgccggtgcgcagggcaacttccagctcaacgtgaacctgccggtg
atcgccaggaacgtgctggagtccgcgcgcctgctcgccgcggtttcgcgcctgctggcg
gacaaggttttcgccggggtcacggtgaacaccgaccgggcgcgtgaatacgccgaaggt
tcgccgtcgatcgtgacgccgctgaacaagtacatcggctacgaagaggcggcggccgtg
gcgaagcaggcgctcaaggaactgaagacgatccgcgaggtggtcatcgaacgcggtcac
gtcgccgacggcaagctgaccgaagcccagctggacgaggcgctcgacgtgctccggatg
gcccgcggcggcaagtag
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