KEGG   Amycolatopsis sp. YIM 10: YIM_05295
Entry
YIM_05295         CDS       T06270                                 
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
amyy  Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:amyy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amyy03400]
    YIM_05295 (sbcD)
DNA repair and recombination proteins [BR:amyy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     YIM_05295 (sbcD)
    Archaeal homologous recombinant proteins
     YIM_05295 (sbcD)
SSDB
Motif
Pfam: Metallophos SbcD_C Metallophos_2 eRF1_3 FBPase_2
Other DBs
NCBI-ProteinID: QFU86277
UniProt: A0A5P9PEG3
LinkDB
Position
1054067..1055236
AA seq 389 aa
MNMKVLHTSDWHVGRTFHGTDLLAEQEAVLTHLAELVSAEAVDVVLVAGDVYDRAVPSAE
AVRAATRGLEQIREAGARVVITPGNHDSAARLGAFAGFAAAGGLYLRTTIEELHEPVLFE
DDHGPIACYGIPYLEPEPARHALGVPEAKGHTGVLTEAMRRIREDLATRPDGTRSIVLAH
AFVSGAAPTESERTIAVGGVEDVDGSVFDGVDYVALGHLHGPQVLADHLRYSGSPLAYSF
SEAQQRKSVWLVELDAAGLAGVTRHDLPVPRRLATLRGKLEELLQSPDHTEFEDCYLSIT
LTDEVRPIDAMRKLRARFAHAVHLEWEPDGGRATGELKYSEAIRGRSDLEIASTFVADCR
GAAPNESEQALLTRALEEAGKLEAVGPEL
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgaacatgaaggtcctgcacacgtcggactggcacgtcgggcgcaccttccacggcacc
gacctgctggccgagcaggaggccgtgctgacccacctcgccgagctggtctcggccgag
gcggtggacgtcgtgctcgtcgccggggacgtgtacgaccgcgcggtgccctccgccgag
gccgtgcgggccgcgaccaggggcctggagcagatccgcgaggccggcgcccgcgtggtg
atcacgccgggcaaccacgattcggccgcgcggctgggcgcgttcgccgggttcgccgcg
gcgggcgggctgtacctgcgcaccaccatcgaggaactgcacgagccggtgctcttcgag
gacgaccacggcccgattgcctgctacggaatcccttacctggagccggaaccggctcgt
cacgcgctcggcgtgccggaggcgaaggggcacaccggcgtgctcaccgaagcgatgcgg
cgcattcgcgaggacctcgccacccgtcctgacggaacccggtccatcgtgctcgcgcac
gcttttgtcagcggtgccgcgcccaccgagtccgaacgcaccatcgccgtcggcggcgtc
gaggacgtcgacggctcggttttcgacggcgtggactacgtcgcgctcggccacctgcac
ggcccgcaggtcctcgccgaccacctgcgttactccggcagcccgctcgcatactcgttt
tccgaagctcagcaacggaaatcggtgtggctggtggagctcgacgcggccgggctcgcc
ggggtcacgcggcacgacctgcccgtgccgcgccgcctcgccacgctgcgcggcaagctc
gaagaactgctccaatcgcctgaccacaccgaattcgaggactgctacctctcgatcacg
ctgaccgacgaggtccgcccgatcgacgcgatgcgcaagctgcgcgccaggttcgcccac
gccgtgcacctggaatgggagccggacggcggtcgcgccaccggagaactcaagtactcg
gaagcgatccgcggccggtccgatctggagatcgcgtccaccttcgtggccgactgccgc
ggcgccgcgcccaacgagtccgagcaggcgctgctcacccgcgcgctggaggaagcgggc
aagctcgaggcggtgggcccggaactatga

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