Amycolatopsis sp. YIM 10: YIM_05300 Help Entry YIM_05300         CDS       T06270                                  Symbol sbcC Name (GenBank) Nuclease SbcCD subunit C   KO K03546   DNA repair protein SbcC/Rad50 Organism amyy  Amycolatopsis sp. YIM 10 Brite KEGG Orthology (KO) [BR:amyy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:amyy03400]     YIM_05300 (sbcC) DNA repair and recombination proteins [BR:amyy03400]  Prokaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     RecBC pathway proteins      YIM_05300 (sbcC)     Archaeal homologous recombinant proteins      YIM_05300 (sbcC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SbcC_Walker_B AAA_27 AAA_29 SMC_N TsaE ABC_tran AAA_21 NACHT AAA_22 Motif Other DBs NCBI-ProteinID:  QFU86278 UniProt:  A0A5P9PDC7 LinkDB All DBs Position 1055233..1058181 Genome browser AA seq 982 aa AA seqDB search MRLHRLEVAAFGPFAGREVVDFDALGADGLFLLHGDTGAGKTTLLDAVAFALFGVVPGAR NEAKKLRCELAEAEQVTEVVLEVTVQGQRLRLVRSPEYDRPKRSGDGTTKQRAKCSLSWV GETPAGQPADGLTRIDEVARTVQRLLGMSADQFFQVVLLPQGEFARFLRADTAEREQLLE RLFGTKRFSDVEAWFRNLRTERMRDLEIRRQTVREWVARLSQAAGVEAPEEVSSTWAVEL RERADAEVARALAAETAARKAWDAADQRLQEGRTFVEQVRRVRVAMTNLASWKEGEVERR RWTAEIAAARRAIPVAEAVATEERLKERLTEVQQNAKQRAQTLARTKASVPELRQEAGAL REEAGALSGLVEEGEQQRRDKERLGRLAVQADQANERAKTLGAKLATMPARSEELRSRVE AATQAAAKLDGAQARADELTRAVASANRIPAAEEAVRAATEVQAKAVDLHQEARAHLLDL RERRLSGMAAELAAKLADGDPCPVCGSAEHPAPALAGQQQVGEAEERTAAEAERAADARR QEALEARHQAESGLGALREALLGRTAEDLATELTEVRANVAELAELAEHRERLEQEQRGL AAEIERLTEQRAAAERESAKAEAEQQALAVTVAERAQRLDEARKEYEDVAARRAALLARV KAIEELAEVRAAVVVAEERLAEQRETVAEVLRRAEFKTVKKALGAVRDEAYIARLDEALV EADRAAAVAQSTLTEPELAGITGDEVVDLDAAREALEQASAQVESAVAAHRAAARIAEDL AALGTRFDAALRKLAPAEEEVAELDALTDVVNGRGQNARKISLRSYVLAARLEEVALAAT ARLRTMSQGRYSFVHSDAAGARGTRGGLGLDVLDDFSGTVRPAKTLSGGESFLASLALAL GLADVVAAQTGSALLDTLFIDEGFGTLDAETLDVVMNVLDELRAGGRVVGLVSHVEELRQ RIPTRLKVRKARSGSTLALHAG NT seq 2949 nt NT seq  +upstreamnt  +downstreamnt atgaggctgcaccggctggaagtcgccgccttcggcccgttcgcgggccgcgaggtggtg gatttcgacgcgctcggtgccgacggcctcttcctgctgcacggcgacaccggcgccggc aagaccaccctgctcgacgccgtcgcgttcgcgttgttcggcgtggttcccggtgcccgc aacgaagcgaagaagctgcgctgcgaactcgcggaggccgagcaggtgaccgaggtggtg ctcgaggtgaccgtgcaggggcagcggctccggctggtccgcagtcccgagtacgaccgc cccaagcgcagtggcgacggcaccaccaagcagcgcgcgaagtgctcgctttcgtgggtc ggcgagaccccggccgggcagcccgccgacggcctgaccaggatcgacgaggtcgcgcgc accgtgcagcgcctgctcgggatgagcgcggaccagttcttccaggtggtgttgctgccg cagggcgaattcgcccggttcctccgcgcggacaccgccgagcgcgagcagttgctggag cgcctcttcggcaccaagcgcttctcggacgtcgaggcgtggttccggaacttgcggacc gaacgcatgcgggacctggagatccgccgtcagaccgtgcgggagtgggtcgcgcgcctg tcgcaggcggccggggtcgaggcgccggaggaggtcagttccacctgggcggtggagttg cgcgagcgcgccgacgccgaggtggcgcgggcgctcgccgccgagaccgcggcccgcaag gcgtgggacgccgcggaccagcgcctgcaggagggccgcacgttcgtcgagcaggtccgc cgcgtgcgggtggcgatgacgaatctggcgtcctggaaggaaggcgaggtcgaacgccgt cgctggacggccgagatcgccgccgcgcgccgggcgatcccggtggccgaggcggtggcc accgaagagcggctgaaggagcgcctcaccgaggtccagcagaacgccaagcagcgggcg caaacgcttgcgcgcaccaaggcgtccgtgcctgagctgcggcaggaggccggtgcgctg cgcgaagaggcgggcgcgttgtccgggctcgtcgaagagggcgagcagcagcggcgggac aaggagcgcctgggcaggctcgccgtgcaggcggatcaggcgaacgagcgggcgaaaacg ctgggcgccaaactcgccaccatgcccgcccgctcggaggaactgcggtcacgggtggag gcggcgacgcaggccgccgcgaagctggacggcgcgcaggcccgtgctgacgagctgacc cgcgcggtcgcctcggccaaccggatcccggccgcggaagaggccgtgcgtgccgcgacg gaggtgcaggcgaaagccgtcgacctgcaccaggaagcccgcgcgcacctgctcgacctg cgggaacggcggctcagcggaatggcggccgagctggcggcgaagctggccgacggcgat ccgtgcccggtgtgcggttccgccgagcaccccgcgcccgcgctcgccgggcagcagcag gtcggcgaggccgaggaacggaccgcggccgaggcagagcgcgcggcggatgcccggcgc caggaggctctggaagctcgtcaccaggccgaaagcgggctcggcgcgttgcgggaagcg ttgctcggccgcaccgcggaggatctcgccacggagttgaccgaggtcagggcgaacgtg gccgagctggccgagttggccgagcaccgcgaacggctggagcaggagcagcgcgggctg gccgccgagatcgagcggctgaccgagcagcgggccgcggccgagcgcgagtcggcgaag gcggaagccgagcagcaagcgcttgcggtgaccgtcgccgagcgcgcgcagcggctcgac gaagcccgcaaggagtacgaggacgtggccgcgcgccgggccgcgttgctggcgcgggtc aaggcgatcgaggagctggccgaggtccgggcggcggtcgtggtcgccgaggaacggctc gccgagcaacgcgagaccgtcgcggaagtgttgcggcgtgcggagttcaagacggtgaag aaggcgctgggcgcggttcgcgacgaggcctacatcgcacggctggacgaggctctggtc gaggcggaccgcgcggcggcggtcgcgcagtccacgctcaccgagcccgaactggccggg atcaccggtgacgaggtcgtggacctcgatgccgcgcgcgaggccctggagcaggcgtcg gcgcaggtcgagtcggccgtggccgcacatcgggccgccgcgcgcatcgccgaggacctc gccgcgctgggcacccgcttcgacgccgcgttgcgcaagctcgcgcccgcggaagaagag gttgccgagctggacgcgctgaccgacgtggtgaacggccgcgggcagaacgcacggaag atctcgctgcgatcgtacgtgctggccgcgcggctggaggaggtcgcgctggccgcgacg gcccgcctgcgcacgatgagccagggccgctattccttcgtgcactcggacgcggcgggc gcgcgtggcacccgcggtggcctcgggctggacgtgctcgacgacttctccggcacggtc cgcccggcgaaaaccctgtccggcggggaatccttcctcgcgtcgctcgcgctggcactc ggcctggcggacgtcgtcgccgcgcagaccggcagcgcgctgctggacacgctgttcatc gacgagggcttcggcacgctcgatgccgaaacgctggacgtggtgatgaacgtgctcgac gagctgcgggccggtgggcgcgtggtcgggctggtgtcgcatgtggaggaactgcgtcag cgcatcccgacccggctcaaggtgcggaaggcgcgctccggctcgacgctggcgctacac gccggctga

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