Amycolatopsis sp. YIM 10: YIM_05605
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Entry
YIM_05605 CDS
T06270
Symbol
rsgA1
Name
(GenBank) Putative ribosome biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00730
Thiamine metabolism
amyy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
YIM_05605 (rsgA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amyy03009
]
YIM_05605 (rsgA1)
Enzymes [BR:
amyy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
YIM_05605 (rsgA1)
Ribosome biogenesis [BR:
amyy03009
]
Prokaryotic type
GTPases
YIM_05605 (rsgA1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_16
ABC_tran
AAA_29
AAA_25
NACHT
AAA_33
AAA_22
nSTAND1
MobB
Dynamin_N
Roc
FeoB_N
NB-ARC
AIG1
Septin
Motif
Other DBs
NCBI-ProteinID:
QFU86339
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Position
complement(1127062..1128066)
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AA seq
334 aa
AA seq
DB search
MSRRDWRKLDESDVRVRPGKGTRPRSKRRPEHADATTAMVTGVDRGRWTCAIEGDPERSV
TAMRARELGRTPVVVGDSVGLVGDVSGRQDTLARIVRVDERTSVLRRTADDTDPFERVVV
ANAEQLVIVTALADPPPRTGFIDRCLVACYAGGLEPLLCLTKADLADPAELLAGYADLAV
PAVVTRHDEEPDALRERVDGRVSALVGHSGVGKSTLVNRLVPDAALATGVVSAVGKGRHT
SVAAIALPLPGDGWVIDTPGIRSFGLAHVTPDDIVDSFEEFTEAAEECPSGCGHLGPPED
PDCVLDDVVTDGDAKPERLASLRRLLVSRAGLES
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgacgggattggcgcaagctggatgaatcggacgtccgcgtccgccctggcaag
ggcacccgcccgcggagcaagcgccgccccgagcacgccgacgccaccaccgcgatggtc
accggcgtcgaccgcggccgctggacctgcgcgatcgagggggatcccgaacgctcggtg
accgcgatgcgcgcccgcgagctcggccgcacgccggtggtggtcggcgactcggtcggc
ctggtcggcgacgtcagcggccgccaggacaccctcgccaggatcgtccgcgtcgacgag
cgcaccagcgtgctgcgccggaccgccgacgacaccgatccgttcgaacgggtggtggtg
gcgaacgccgagcagctggtcatcgtcaccgcgctggccgatccgccgccgcgcaccggg
ttcatcgaccgctgcctggtcgcctgctacgcgggcgggctcgaaccgctgctctgcctg
accaaggccgatctggccgatccggccgaactgctcgccgggtacgccgatctggccgtg
cccgccgtggtcacccggcacgacgaggagccggacgcgctgcgcgagcgggtcgatggc
cgggtctcggcgctggtcgggcattcgggggtgggcaagtccaccctggtcaaccggctg
gtcccggacgccgcgctggcgaccggcgtggtcagcgcggtcggcaaggggcggcacacc
tcggtggccgccatcgcgctgccgctgcccggcgacggctgggtgatcgacacgcccggc
atccgctcgttcggcctggcgcacgtcaccccggacgacatcgtggactcgttcgaggag
ttcaccgaggccgccgaggagtgcccgtctggctgcggccacctcggcccgccggaggat
ccggactgcgtactggacgacgtcgtcacggacggtgacgccaagccagaacggctcgct
tcactcagaaggctgcttgtctcccgcgccggtctcgaatcgtga
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