Amycolatopsis sp. YIM 10: YIM_06245
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Entry
YIM_06245 CDS
T06270
Symbol
sigI2
Name
(GenBank) putative ECF RNA polymerase sigma factor SigI
Organism
amyy
Amycolatopsis sp. YIM 10
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Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
MarR_2
Motif
Other DBs
NCBI-ProteinID:
QFU86466
UniProt:
A0A5P9PDV8
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Position
1265454..1266680
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AA seq
408 aa
AA seq
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MPGTEVEDLLRPLAPQVLGALVRRFGHFDLAEDAVQEALLAAATQWPGAGVPDNPRGWLI
TVASRRLTDLLRSEYARRRREDTVAQQVLPEEWLAPAADRSEPVADDTLVLLFLCCHPSL
SPASQIALTLRAVGGLTTTEIARAFLVPEATMTRRISRAKQRIKDSGVPFGMPADPARLA
AVLHVLYLIFNEGYASTSGPELQRTELTAEAVRLARVLHALLPEDSEVAGLLALMLLTDA
RRAARTGPGGALVPMSEQDRSRWNQANITEGVELITAALPRGPVGEYQLQAAIAAVHDEA
PSAAETDWPQIIALYEALMRLSDNPVVALNHCVAVAMARGPRAGLELLAEVDDRLPGDHR
VEAVRGHLLELAGDLDGARESYVAAASRATSLPQQRYLHGRAGRLAEH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtaccgaggtcgaggacctgctgcgcccgctcgcgccgcaggtcctcggcgcg
ctggttcgccggttcggccacttcgacctcgcggaggacgcggtgcaggaggccctgctc
gcggccgccacgcagtggcccggcgccggggtgccggacaacccgcgaggctggctgatc
accgtcgcgtcccggcggctgaccgacctgctgcgcagcgagtacgcccgccgtcgccgc
gaggacaccgtggcgcagcaggtgctgcccgaggaatggctggcccccgccgcggatcgg
tccgagccggtcgccgacgacacgctggtgctgctgttcctgtgctgccacccgtcgctg
tccccggcttcgcagatcgcgctgacgctgcgcgcggtcggcggcctgaccaccaccgag
atcgccagggccttcctcgtgccggaggcgacgatgacccggcggatcagccgcgccaag
cagcgcatcaaggacagcggtgtgccgttcggaatgcccgcggatcccgcgcgcctggcc
gccgtgctgcacgtgctctacctgatcttcaacgagggctacgccagcacttcgggcccg
gaactgcaacgaaccgaactgaccgccgaggcggtccggctggcacgcgtgctgcacgcg
ctcctgcccgaggacagcgaggtggccggactgctcgcgctgatgctgctcaccgacgcc
cgtcgtgccgcgcgcaccgggccgggtggtgcgctggtgccgatgtccgaacaggaccgg
agccgctggaaccaggccaatatcaccgagggcgtcgagctgatcaccgccgcgctgccc
cgcggcccggtgggggagtaccagttgcaggcggcgatcgccgccgtgcacgacgaggca
cccagcgcggcggaaaccgactggccgcagatcatcgcgctctacgaagcactgatgcgg
ttgtccgacaacccggtggtggcgttgaaccactgcgtcgcggtggcgatggcgcgggga
ccgcgtgccggactggaactgctggcggaggtggacgaccgcctgcccggtgaccaccgc
gtggaggcggtgcgcggtcacctgctggaactggcaggtgatctggacggcgcacgcgag
tcctatgtggccgcagcgagccgcgcgacgagcctgccacagcagcgttaccttcatggc
agagccggacggctcgctgagcactga
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