KEGG   Amycolatopsis sp. YIM 10: YIM_06275
Entry
YIM_06275         CDS       T06270                                 
Symbol
lysA1
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
amyy  Amycolatopsis sp. YIM 10
Pathway
amyy00300  Lysine biosynthesis
amyy00470  D-Amino acid metabolism
amyy01100  Metabolic pathways
amyy01110  Biosynthesis of secondary metabolites
amyy01120  Microbial metabolism in diverse environments
amyy01230  Biosynthesis of amino acids
Module
amyy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:amyy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    YIM_06275 (lysA1)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    YIM_06275 (lysA1)
Enzymes [BR:amyy01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     YIM_06275 (lysA1)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QFU86472
LinkDB
Position
1272583..1274019
AA seq 478 aa
MAHPAGPRYAEVHAHADTAGFPPSTSGELDRLYPKVWPRNAFRAPDGVVRIAGVDVRELA
ETYGTPLFVIDEADFKSRCAEYAEAFDDPALVHYASKAFLSTEVARWVAAQGLSLDVCSG
GELAIAQRAEFPPERITFHGNNKSAAELEMAVEAGVGTVVLDSYFEIARLAEVAARREIV
QQVMVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNAGSLKLIGLHSHIG
SQIFDADGFEVAARRIIGLIAELGKEHGPELVDQLSIVDLGGGFGIAYTDRDNPPPPAQM
ITQIREIVRKECAFAGLPVPRIAGEPGRAIAGPGTVTLYEVGTIKDVTLGDNAVRRYVSV
DGGMSDNIRTSLYDAVYDARLVSRAAGDGQDGEANAALSRVVGKHCESGDIVVRDCWLPD
NLAPGDLLAVAATGAYCYSMASNYNRQPRPAVVSVRNGGARLLLRRETTEDMLGLEVS
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggctcaccccgcgggaccccggtacgccgaggtccatgcccatgcggacaccgccggg
ttcccgccgtccacttcgggcgaactggaccggctctacccgaaggtgtggccccgcaac
gccttccgcgccccggacggtgtggtccggatagccggggtcgacgtgcgggagctggcc
gagacctacggcaccccgctcttcgtcatcgacgaggccgacttcaagtcccgctgcgcc
gagtacgccgaggccttcgacgacccggcgctggtgcactacgcgtccaaggcgttcctg
tccaccgaggtcgcccgctgggtggccgcgcagggcctgagcctggacgtgtgcagcggc
ggcgagctggccatcgcccagcgcgcggagttcccgcccgagcggatcaccttccacggc
aacaacaagtcggccgccgagctggagatggcggtcgaggccggggtgggcacggtggtg
ctcgactcgtacttcgagatcgccaggctggccgaggtggccgcgcgccgcgagatcgtc
cagcaggtgatggtgcgggtcaccgtcggcgtcgaggcgcacacgcacgagttcatcgcg
accgcgcacgaggaccagaagttcggcttctcgctggcctccggggacgccgccgaggcg
gtgcgccgggtgctcaacgccggttcgctgaagctgatcggcctgcacagccacatcggc
tcgcagatcttcgacgccgacggcttcgaggtggccgcccgccggatcatcgggctgatc
gccgaactgggcaaggaacacggcccggagctggtcgaccaactgtccatagtggaccta
ggtggtggcttcggcatcgcctacaccgatcgcgacaacccgccgccgccggcgcagatg
atcacccagatccgggagatcgtgcgcaaggagtgcgccttcgccgggctgccggtgccg
cgcatcgccggtgagccgggccgcgcgatcgccggtcccggcacggtcacgctctacgag
gtcggcacgatcaaggacgtcacgctgggggacaacgcggtacgccgctacgtcagcgtc
gacggcgggatgagcgacaacatccgcacctcgctctacgacgcggtctacgacgcgcgg
ctggtctcgcgggccgccggtgacggccaggacggcgaagcgaacgccgcgttgtcccgc
gtggtgggaaaacactgtgagtccggcgacatcgtggtccgcgactgctggttgcccgac
aacctggctcccggtgacctgctcgcggtcgccgcgaccggtgcctactgctattcgatg
gccagcaactacaaccgccagccgcgcccggcggtggtctcggtgcgcaacggcggggcg
cggctgctgctccgccgggaaaccaccgaggacatgctgggcttggaggtgtcgtga

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