Amycolatopsis sp. YIM 10: YIM_06275
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Entry
YIM_06275 CDS
T06270
Symbol
lysA1
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00300
Lysine biosynthesis
amyy00470
D-Amino acid metabolism
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01120
Microbial metabolism in diverse environments
amyy01230
Biosynthesis of amino acids
Module
amyy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YIM_06275 (lysA1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YIM_06275 (lysA1)
Enzymes [BR:
amyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
YIM_06275 (lysA1)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QFU86472
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Position
1272583..1274019
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AA seq
478 aa
AA seq
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MAHPAGPRYAEVHAHADTAGFPPSTSGELDRLYPKVWPRNAFRAPDGVVRIAGVDVRELA
ETYGTPLFVIDEADFKSRCAEYAEAFDDPALVHYASKAFLSTEVARWVAAQGLSLDVCSG
GELAIAQRAEFPPERITFHGNNKSAAELEMAVEAGVGTVVLDSYFEIARLAEVAARREIV
QQVMVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNAGSLKLIGLHSHIG
SQIFDADGFEVAARRIIGLIAELGKEHGPELVDQLSIVDLGGGFGIAYTDRDNPPPPAQM
ITQIREIVRKECAFAGLPVPRIAGEPGRAIAGPGTVTLYEVGTIKDVTLGDNAVRRYVSV
DGGMSDNIRTSLYDAVYDARLVSRAAGDGQDGEANAALSRVVGKHCESGDIVVRDCWLPD
NLAPGDLLAVAATGAYCYSMASNYNRQPRPAVVSVRNGGARLLLRRETTEDMLGLEVS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccccgcgggaccccggtacgccgaggtccatgcccatgcggacaccgccggg
ttcccgccgtccacttcgggcgaactggaccggctctacccgaaggtgtggccccgcaac
gccttccgcgccccggacggtgtggtccggatagccggggtcgacgtgcgggagctggcc
gagacctacggcaccccgctcttcgtcatcgacgaggccgacttcaagtcccgctgcgcc
gagtacgccgaggccttcgacgacccggcgctggtgcactacgcgtccaaggcgttcctg
tccaccgaggtcgcccgctgggtggccgcgcagggcctgagcctggacgtgtgcagcggc
ggcgagctggccatcgcccagcgcgcggagttcccgcccgagcggatcaccttccacggc
aacaacaagtcggccgccgagctggagatggcggtcgaggccggggtgggcacggtggtg
ctcgactcgtacttcgagatcgccaggctggccgaggtggccgcgcgccgcgagatcgtc
cagcaggtgatggtgcgggtcaccgtcggcgtcgaggcgcacacgcacgagttcatcgcg
accgcgcacgaggaccagaagttcggcttctcgctggcctccggggacgccgccgaggcg
gtgcgccgggtgctcaacgccggttcgctgaagctgatcggcctgcacagccacatcggc
tcgcagatcttcgacgccgacggcttcgaggtggccgcccgccggatcatcgggctgatc
gccgaactgggcaaggaacacggcccggagctggtcgaccaactgtccatagtggaccta
ggtggtggcttcggcatcgcctacaccgatcgcgacaacccgccgccgccggcgcagatg
atcacccagatccgggagatcgtgcgcaaggagtgcgccttcgccgggctgccggtgccg
cgcatcgccggtgagccgggccgcgcgatcgccggtcccggcacggtcacgctctacgag
gtcggcacgatcaaggacgtcacgctgggggacaacgcggtacgccgctacgtcagcgtc
gacggcgggatgagcgacaacatccgcacctcgctctacgacgcggtctacgacgcgcgg
ctggtctcgcgggccgccggtgacggccaggacggcgaagcgaacgccgcgttgtcccgc
gtggtgggaaaacactgtgagtccggcgacatcgtggtccgcgactgctggttgcccgac
aacctggctcccggtgacctgctcgcggtcgccgcgaccggtgcctactgctattcgatg
gccagcaactacaaccgccagccgcgcccggcggtggtctcggtgcgcaacggcggggcg
cggctgctgctccgccgggaaaccaccgaggacatgctgggcttggaggtgtcgtga
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