Amycolatopsis sp. YIM 10: YIM_08285
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Entry
YIM_08285 CDS
T06270
Symbol
cdhR3
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyy03000
]
YIM_08285 (cdhR3)
Transcription factors [BR:
amyy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
YIM_08285 (cdhR3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QFU86868
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Position
complement(1672304..1673224)
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AA seq
306 aa
AA seq
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MSTVALAATDGMLHFELGVACEIFGSGTPHYDLLVCGSGPLRAGRFRLEPDHGLDRLVGA
DTVLVPALADVDEPPPAELLDAVRAAHEAGARVASLCTGAFALAAAGLLDGLRATTHWAH
TDALAARFPLVEVDPDVLYVDNGSVLTSAGKAAAVDLCLHLVRLDHGSAVANAAARRLVV
PPHRAGGQAQFVATPVPAGDDHPLTALLPWVTERLDQPLTVEDLARQANLSSRHLGRQFR
SATGTTPLRWLLTQRIRRAQELLETTGDSIDAIASAVGMGTATTLRRHFNRTVGVPPDTY
RRTFRS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtcgcgctggccgccaccgacggcatgctgcacttcgaactgggcgtggcc
tgcgagatcttcggctccggcaccccgcactacgacctgctcgtctgcggttccgggccg
ctgcgggccggtcgcttccggctggagccggaccacgggctcgaccggctggtgggggcc
gacaccgtgctcgtcccggcactggccgacgtcgacgagccgccaccggccgaactgctg
gacgcggtgcgcgcggcccacgaggcgggcgcgcgggtggcctcgctctgcacgggtgcg
ttcgcgctggccgccgccgggctgctcgacgggttgcgcgccaccacgcactgggcccac
accgacgcgctggccgcccggttcccgctggtcgaggtcgatccggacgtgctctacgtg
gacaacgggagcgtgctcacctccgcgggcaaggccgccgcggtcgacctgtgcctgcac
ctggtccgcctcgaccacggttccgccgtggcgaacgcagccgcccggcggctggtggtg
ccgccgcaccgggccggcggccaggcgcagttcgtcgccacgccggtcccggccggcgac
gaccacccgctgaccgcgctgctgccctgggtgaccgaacggctggaccagccgctgacc
gtggaagacctggcgcgccaggcgaacctgagttcgcggcacctcggccgccagttccgg
tcggccaccggcaccacgccgctgcggtggctgctcacccagcggatccgccgcgcgcag
gaactactggaaaccaccggcgacagcatcgacgccatcgcttcggccgtcggcatgggc
accgccaccaccctgcggcgccacttcaaccggacggtcggcgtgccgccggacacctac
cgccgcacgttccggagctag
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