KEGG   Amycolatopsis sp. YIM 10: YIM_10160
Entry
YIM_10160         CDS       T06270                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
amyy  Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:amyy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amyy03032]
    YIM_10160
   03036 Chromosome and associated proteins [BR:amyy03036]
    YIM_10160
   03400 DNA repair and recombination proteins [BR:amyy03400]
    YIM_10160
DNA replication proteins [BR:amyy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    YIM_10160
Chromosome and associated proteins [BR:amyy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    YIM_10160
DNA repair and recombination proteins [BR:amyy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      YIM_10160
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QFU87238
UniProt: A0A5P9PG08
LinkDB
Position
2041111..2041761
AA seq 216 aa
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVVSGAKKLPKVTAAKRATAGTRAASTTTRATTT
RATASRPSTTRSTTTRTRATTTRSTAASRTAAKAAPKTAAKATTAKATTAKKTTAKAAPK
AAAKTTTAKATTKAAPKATAAKKTTAAKRTTAAKKK
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgtctgggcgacaaaaaggtt
gcatcggaagcggtcgacggtctcgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggggtgttcgagaagcgcgcccgcgccgcccggaccgcg
cggaacccgcgtaccggtgagacggtccgcgtcaagaagaccaacgtgcccgccttccgc
gccggcacgaccttcaaggacgtggtgagcggcgcgaagaagctgccgaaggtcaccgcc
gccaagcgcgccaccgcgggtacccgtgccgcgagcaccaccactcgcgccaccaccacc
cgggcgacggccagccgtccgagcaccacccgcagcaccacgactcgcacgcgcgccacc
accacgcgcagcaccgccgcgagccgtaccgctgccaaggcggcgccgaagacggccgcg
aaggccaccacggccaaggcgaccacggcgaagaagaccaccgccaaggccgctccgaag
gcggcggcgaagaccaccaccgccaaggccaccaccaaggccgctcccaaggcgaccgcc
gcgaagaagaccaccgcggccaagcgcaccaccgccgcgaagaagaagtag

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