Amycolatopsis sp. YIM 10: YIM_10160
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Entry
YIM_10160 CDS
T06270
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyy03032
]
YIM_10160
03036 Chromosome and associated proteins [BR:
amyy03036
]
YIM_10160
03400 DNA repair and recombination proteins [BR:
amyy03400
]
YIM_10160
DNA replication proteins [BR:
amyy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YIM_10160
Chromosome and associated proteins [BR:
amyy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
YIM_10160
DNA repair and recombination proteins [BR:
amyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
YIM_10160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QFU87238
UniProt:
A0A5P9PG08
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All DBs
Position
2041111..2041761
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AA seq
216 aa
AA seq
DB search
MANKAQLIEALSERLGDKKVASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGETVRVKKTNVPAFRAGTTFKDVVSGAKKLPKVTAAKRATAGTRAASTTTRATTT
RATASRPSTTRSTTTRTRATTTRSTAASRTAAKAAPKTAAKATTAKATTAKKTTAKAAPK
AAAKTTTAKATTKAAPKATAAKKTTAAKRTTAAKKK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgtcggagcgtctgggcgacaaaaaggtt
gcatcggaagcggtcgacggtctcgtcgacatcatcatccggacggtcaacaagggcgag
aaggtgaacatcaccggcttcggggtgttcgagaagcgcgcccgcgccgcccggaccgcg
cggaacccgcgtaccggtgagacggtccgcgtcaagaagaccaacgtgcccgccttccgc
gccggcacgaccttcaaggacgtggtgagcggcgcgaagaagctgccgaaggtcaccgcc
gccaagcgcgccaccgcgggtacccgtgccgcgagcaccaccactcgcgccaccaccacc
cgggcgacggccagccgtccgagcaccacccgcagcaccacgactcgcacgcgcgccacc
accacgcgcagcaccgccgcgagccgtaccgctgccaaggcggcgccgaagacggccgcg
aaggccaccacggccaaggcgaccacggcgaagaagaccaccgccaaggccgctccgaag
gcggcggcgaagaccaccaccgccaaggccaccaccaaggccgctcccaaggcgaccgcc
gcgaagaagaccaccgcggccaagcgcaccaccgccgcgaagaagaagtag
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