Amycolatopsis sp. YIM 10: YIM_10245
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Entry
YIM_10245 CDS
T06270
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YIM_10245 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyy03400
]
YIM_10245 (ung)
Enzymes [BR:
amyy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YIM_10245 (ung)
DNA repair and recombination proteins [BR:
amyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YIM_10245 (ung)
Prokaryotic type
YIM_10245 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QFU87255
UniProt:
A0A5P9PGH5
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All DBs
Position
2058395..2059072
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AA seq
225 aa
AA seq
DB search
MTARPLHEIVEAGWAKALAPVEGNIARMGEFLRAEIAAGRTYLPAGENVLRAFKQPFDGV
RVLVVGQDPYPTPGHAIGLSFAVAPEVRPLPKSLVNIYKEYAEDLGHPLPSNGDLTPWTE
QGVLLLNRALTVRPGKPNSHQGKGWEEVTEQAIKALAERGGPLVAILWGSNARKLKPLLG
GVPCVESVHPSPLSAHNGFFGSRPFSRVNELLVQQGAQPVDWKLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacgaccgctgcacgagatcgtcgaagcaggctgggcgaaggccctcgctccg
gtggagggcaacatcgccaggatgggcgagttcctccgcgcggagatcgccgccggccgc
acctacctcccggcgggggagaacgtcctgcgggcgttcaagcaaccgttcgacggggta
cgcgtgctcgttgtcggccaggacccgtacccgacgccggggcacgccatcgggctgtcc
ttcgccgtcgcgccggaggtccggccgctgccgaagagcctggtgaacatctacaaggag
tacgccgaggacctcggccacccgctgccgtccaacggggacctgacgccgtggaccgag
cagggcgtgctgctgctcaaccgcgccctcacggtgcggcccggcaagccgaactcccac
cagggcaagggctgggaggaggtcaccgagcaggcgatcaaggcactggccgaacgcggt
ggcccgctggtggcgattctctggggcagcaacgcccgcaagctcaagccgctgctgggc
ggggtgccgtgcgtggagtcggtgcacccgagcccgctctccgcgcacaacggcttcttc
ggctcacgcccgttcagccgggtgaacgaactcctcgtccagcagggcgcgcaaccggtc
gactggaagctcccgtaa
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